| Interpro Signature | Unipeptide Families |
| (2R)-phospho-3-sulfolactate synthase, ComA | 3945, 10590, 13675 |
| (Uracil-5)-methyltransferase | 8804, 10178 |
| 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase | 4552, 10823 |
| 1-aminocyclopropane-1-carboxylate synthase | 252, 620, 740, 1592, 1697, 14004, 19757 |
| 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1619, 19931 |
| 11-S plant seed storage protein | 102, 919, 4671, 16153, 18814, 20095 |
| 14-3-3 protein | 10, 3038, 8121, 9442, 19572 |
| 16S rRNA processing protein RimM | 7236 |
| 2 , 3 cyclic phosphodiesterase, plant | 4924 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | 263 |
| 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 8252 |
| 2-nitropropane dioxygenase, NPD | 3163, 12195, 12606, 22014 |
| 2-oxo acid dehydrogenase, lipoyl-binding site | 139, 790, 916, 1092, 3619, 4162, 4318, 15299, 15606, 16576 |
| 2-oxoglutarate dehydrogenase, E1 component | 1208 |
| 2-phosphoglycolate phosphatase, eukaryotic | 1343 |
| 2-S globulin | 2391, 12333 |
| 20S proteasome, A and B subunits | 369, 732, 1102, 1185, 1268, 1282, 1314, 1373, 1581, 1624, 1913, 1921, 2003, 8181, 14986, 15899, 17739 |
| 26S proteasome non-ATPase regulatory subunit Nin1/mts3 | 2005, 17637, 19208 |
| 26S proteasome subunit P45 | 335, 707, 1010, 1026, 1130 |
| 2Fe-2S ferredoxin subdomain | 303 |
| 2Fe-2S ferredoxin, iron-sulfur binding site | 303, 654, 1344, 2202, 6322, 10196, 10710, 17833 |
| 2OG-Fe(II) oxygenase | 104, 163, 201, 218, 281, 1044, 1100, 1381, 1745, 1925, 2199, 2399, 2550, 3185, 4418, 4589, 5231, 5812, 6206, 6654, 7527, 7681, 9485, 11982, 12237, 12485, 12979, 12986, 14556, 16073, 16421, 16450, 16864, 17015, 17935, 18090, 18383, 18760, 19057, 19816, 19847, 19885, 20244, 21684, 22053 |
| 3'-5' exonuclease | 2286, 3457, 4304, 4466, 6597, 7148 |
| 3'-5' exonuclease | 3457, 4304, 5392, 6597, 8214, 9165 |
| 3'5'-cyclic nucleotide phosphodiesterase | 19906 |
| 3(2),5 -bisphosphate nucleotidase HAL2 | 1114 |
| 3,4-Dihydroxy-2-butanone 4-phosphate synthase | 1210 |
| 3-beta hydroxysteroid dehydrogenase/isomerase | 61, 334, 2101, 4126, 21985 |
| 3-dehydroquinate synthase | 5322, 10447 |
| 3-dehydroquinate synthase AroB | 2359 |
| 3-hydroxy-3-methylglutaryl Coenzyme A reductase | 571 |
| 3-hydroxyacyl-CoA dehydrogenase | 350 |
| 3-hydroxyacyl-CoA dehydrogenase, C-terminal | 350, 3375, 20495 |
| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding | 350, 3375 |
| 3-isopropylmalate dehydratase small subunit | 2821 |
| 3-isopropylmalate dehydrogenase | 1911 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | 2898, 5369, 5574, 6591, 8534, 9480, 9546, 11198, 12736 |
| 3-oxoacyl-(acyl-carrier-protein) reductase | 1641 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | 1683 |
| 4'-phosphopantetheinyl transferase | 7361, 7664, 18415 |
| 4-diphosphocytidyl-2-methyl-D-erythritol synthase | 4554 |
| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase | 3132, 3863, 4554 |
| 4-hydroxybenzoate polyprenyl transferase, proteobacterial | 6490 |
| 4-hydroxyphenylpyruvate dioxygenase | 1895 |
| 4Fe-4S ferredoxin, iron-sulfur binding | 1344, 1770, 6894, 7583, 8273, 10966, 11862, 12576, 12580 |
| 5'3'-Exonuclease N- and I-domain | 6775, 11702 |
| 5'-3' exonuclease | 3035, 6817, 10478, 19671 |
| 5'3'-Exonuclease N- and I-domain | 3035, 6817, 10478, 13108, 17295, 19671 |
| 5-AMP-activated protein kinase, beta subunit, complex-interacting region | 1559, 5193, 19838, 20983 |
| 5-formyltetrahydrofolate cyclo-ligase | 3692, 8947 |
| 5-methylthioribose kinase | 2164 |
| 6,7-dimethyl-8-ribityllumazine synthase | 2884 |
| 6-phosphofructo-2-kinase | 1833 |
| 6-phosphogluconate dehydrogenase | 463, 1456, 1959, 3735 |
| 6-phosphogluconate dehydrogenase, C-terminal | 463, 14174 |
| 6-phosphogluconate dehydrogenase, C-terminal-like | 320, 350, 463, 631, 793, 1456, 1799, 1959, 3375, 3735, 4406, 5102, 8519, 10825, 11009, 14174, 17639, 18421, 20495 |
| 6-phosphogluconate dehydrogenase, decarboxylating | 463 |
| 6-phosphogluconate dehydrogenase, NAD-binding | 463, 1456, 1959, 3735, 18421 |
| 6-phosphogluconate-binding site | 463 |
| 6-phosphogluconolactonase | 829 |
| 60 kDa inner membrane insertion protein | 1563, 3532, 15225 |
| 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK | 6125 |
| 7,8-dihydro-8-oxoguanine triphosphatase | 21850 |
| 7-Fold repeat in clathrin and VPS proteins | 932, 2757, 3070, 6386, 8223, 9393, 10588, 12661 |
| 8-oxoguanine DNA glycosylase, N-terminal | 6173 |
| A/G-specific adenine glycosylase MutY | 983, 11022 |
| A49-like RNA polymerase I associated factor | 5872, 15812 |
| AAA ATPase | 80, 82, 85, 106, 144, 157, 203, 204, 228, 265, 307, 335, 400, 476, 707, 958, 959, 1010, 1026, 1047, 1090, 1130, 1135, 1407, 1474, 1484, 1605, 1753, 1818, 1958, 1988, 2002, 2209, 2410, 2632, 2653, 3160, 3505, 3519, 3561, 3659, 3883, 4338, 4532, 4817, 5055, 5329, 5390, 6246, 6248, 6602, 6732, 6801, 6804, 9379, 10241, 11227, 11514, 11719, 14072, 17152, 17509 |
| AAA ATPase VAT, N-terminal | 204, 11921, 12632 |
| AAA ATPase, CDC48 | 204 |
| AAA ATPase, central region | 144, 203, 204, 225, 228, 265, 335, 400, 707, 958, 959, 1010, 1026, 1047, 1130, 1407, 1753, 2002, 3160, 3561, 3659, 3883, 4532, 4825, 6248, 8659, 9379, 9695, 10151, 10241, 10484, 10485, 10582, 11227, 11514, 11719, 12331, 13259, 14245, 14256, 15125, 15306, 15547, 17509, 18309, 20894, 20979 |
| AAA-protein subdomain | 144, 204, 228, 265, 335, 400, 707, 959, 1010, 1026, 1130, 1753, 2002, 9379, 10485, 11514, 13259, 14256 |
| AAR2 | 6944, 12510 |
| AARP2CN | 4051, 14804 |
| AB-hydrolase associated lipase region | 1655, 8329 |
| AB-hydrolase YheT, putative | 3175, 3276 |
| ABA/WDS induced protein | 645, 6024, 6452, 7830, 8039, 16948, 18726 |
| ABC transporter related | 82, 85, 106, 126, 206, 307, 396, 476, 652, 1073, 1135, 1163, 1484, 1930, 1958, 2209, 2303, 2646, 2653, 3084, 3312, 3487, 3505, 3519, 3636, 4002, 4817, 4968, 5055, 5390, 5857, 6732, 7136, 7966, 9964, 10416, 10835, 13228, 13511, 14103, 16155, 20032 |
| ABC transporter, ABCE | 20566 |
| ABC transporter, transmembrane region | 82, 85, 3519, 13666, 13681, 17538 |
| ABC transporter, transmembrane region, type 1 | 82, 85, 3519, 4817, 13666, 13681, 13706, 16040, 17538, 18334 |
| ABC-1 | 518, 1194, 1985, 2813, 2976, 4511, 4956, 11814, 16019, 16216 |
| ABC-2 | 106, 476, 1135, 1484, 5278, 5742, 8210, 9716, 11589, 16344, 18338, 19682 |
| Abortive infection protein | 4363, 5111, 5688, 7676, 9870, 12010, 13838, 18746 |
| Acetamidase/Formamidase | 2126, 19106 |
| Acetate--CoA ligase | 1139 |
| Acetohydroxy acid isomeroreductase | 631 |
| Acetohydroxy acid isomeroreductase C-terminal | 631, 17639 |
| Acetohydroxy acid isomeroreductase, catalytic | 631 |
| Acetolactate synthase, small subunit | 1803, 9760, 17446 |
| Acetyl-CoA biotin carboxyl carrier | 2351, 15869 |
| Acetyl-CoA carboxylase carboxyl transferase, beta subunit | 6209 |
| Acetyl-CoA carboxylase, alpha subunit | 4962, 13698 |
| Acetyl-CoA carboxylase, biotin carboxylase | 2650 |
| Acetyl-coenzyme A carboxyltransferase, C-terminal | 1206, 2360, 4962 |
| Acetyl-coenzyme A carboxyltransferase, N-terminal | 1206, 2360, 6209, 9394 |
| Acetylglutamate kinase | 3345 |
| Acid phosphatase (Class B) | 323, 834, 11243, 20130 |
| Acid phosphatase, type 5 | 1278 |
| Acid phosphatase/vanadium-dependent haloperoxidase | 45, 79, 904, 1825, 4259, 5148, 6997, 7190, 8247, 9812, 13033, 13178, 15273, 20294, 21721 |
| Acid phosphatase/vanadium-dependent haloperoxidase related | 1825, 7190, 9812 |
| Acireductone dioxygenase, ARD | 1096 |
| Aconitate hydratase, C-terminal | 274, 2821, 6016 |
| Aconitate hydratase, N-terminal | 15, 274, 1792, 6016, 6521, 15828, 21124 |
| Actin | 9, 10414, 10422, 12557, 14137 |
| Actin-binding FH2 | 589, 1283, 8183, 11076, 20522 |
| Actin-binding WH2 | 10274 |
| Actin-binding, actinin-type | 32, 175, 1342 |
| Actin-binding, cofilin/tropomyosin type | 136, 8625, 20731 |
| Actin-crosslinking proteins | 1594, 2109, 2407, 10005, 10868, 16565, 16764, 16833 |
| Actin/actin-like | 9, 2633, 4107, 4396, 4575, 4840, 6040, 6044, 9173, 9846, 9983, 10288, 10414, 10422, 12557, 13429, 14137, 16967, 17528, 20439, 20610 |
| Acyl carrier protein (ACP) | 565, 870, 11664, 12947, 13608 |
| Acyl carrier protein-like | 565, 870, 1720, 11664, 12947, 13608, 19187, 19574 |
| Acyl-ACP thioesterase | 607, 13181, 18141, 20789 |
| Acyl-CoA dehydrogenase | 300, 1313, 1603, 7417, 20562 |
| Acyl-CoA dehydrogenase C-terminal-like | 1313, 1438, 1603, 2339, 2674, 2926, 8388, 9453, 9541, 20562 |
| Acyl-CoA dehydrogenase, central region | 1313, 1603, 2339, 2674, 2926, 12659 |
| Acyl-CoA dehydrogenase, middle and N-terminal | 1313, 1438, 1603, 2339, 2674, 2926, 12656, 12659, 15671 |
| Acyl-CoA dehydrogenase, N-terminal | 1313, 1603, 12656 |
| Acyl-CoA dehydrogenase, type 1 | 1313, 1603, 2339, 2674, 2926 |
| Acyl-CoA desaturase | 3797 |
| Acyl-CoA oxidase, C-terminal | 1438, 2926, 8388 |
| Acyl-CoA thioesterase | 3166, 10168, 21883 |
| Acyl-coA-binding protein, ACBP | 1504, 3055, 8379, 9423, 10335 |
| Acyl-CoA_oxidase | 2926 |
| Acylneuraminate cytidylyltransferase | 3223, 16999 |
| Acylphosphatase | 5528, 9883 |
| Adaptin, N-terminal | 962, 974, 1046, 1302, 4426, 7139, 12466, 12734, 14569, 14860, 15916, 15938, 17352, 20060, 21799 |
| Adenine nucleotide translocator 1 | 39, 392, 1105, 1420, 1507, 3665, 3817, 5147, 5162, 7502, 12335, 12700 |
| Adenine phosphoribosyl transferase | 728 |
| Adenosine deaminase/editase | 10001, 21789 |
| Adenosine kinase | 705, 13332 |
| Adenosine/AMP deaminase | 1472, 4207, 10928, 13631, 17658 |
| Adenosine/AMP deaminase active site | 733, 1472, 2194, 4591, 6204, 15870, 18648 |
| Adenylate cyclase | 4416, 7853, 8383 |
| Adenylate kinase | 771, 1013, 1239, 2053, 11644, 14231, 19225, 20338, 20881 |
| Adenylate kinase, lid region | 1239 |
| Adenylate kinase, subfamily | 1239, 2053 |
| Adenylate/cytidine kinase, N-terminal | 771, 1239 |
| Adenylosuccinate synthetase | 1389 |
| Adenylyl cyclase class-3/4/guanylyl cyclase | 13337 |
| Adenylylsulfate kinase | 1788 |
| Adhesion regulating molecule | 4372, 9688 |
| ADP-glucose pyrophosphorylase | 316 |
| ADP-ribosylation factor | 12, 289, 462, 572, 1250, 5247, 9529, 11457, 15599, 17934, 19181, 21892 |
| ADP/ATP carrier protein | 1095, 16238 |
| Adrenodoxin | 4183, 19841 |
| Adrenodoxin reductase | 664, 852, 1255, 1756, 3290, 4015, 5497, 9309, 11224, 11441, 13185, 14066 |
| Aerolysin/hemolysin toxin | 10868 |
| AFG1-like ATPase | 3114, 5776, 11980, 14471, 17662, 18744 |
| Agenet | 2617, 5393, 5935, 9081, 11228, 16911 |
| Agglutinin | 4240, 10868, 20959 |
| Agglutinin2 | 10868, 21748 |
| AICARFT/IMPCHase bienzyme | 2146 |
| AIG1 | 1885, 2093, 10602, 13757 |
| AIG2-like | 3014 |
| AIR synthase related protein | 2621 |
| AIR synthase related protein, C-terminal | 1846, 2621, 17025, 17071 |
| Alanine racemase, N-terminal | 1801 |
| Alanine racemase/group IV decarboxylase, C-terminal | 2274, 3515 |
| Alanyl-tRNA synthetase, class IIc | 3300, 5606, 9538 |
| Alba, DNA/RNA-binding protein | 1195, 4887, 10308, 12134, 20561 |
| Albumin I | 4537 |
| Alcohol dehydrogenase GroES-like | 83, 110, 1163, 1183, 1419, 1422, 2031, 2838, 2913, 3141, 3748, 4242, 10653, 14390, 14523, 19020, 19871 |
| Alcohol dehydrogenase superfamily, zinc-containing | 83, 110, 327, 1163, 1183, 1419, 1422, 2031, 2838, 2913, 3141, 3403, 3715, 3748, 4242, 8663, 10399, 10569, 10653, 11280, 11950, 12896, 14390, 14464, 14523, 15410, 16133, 16605, 17965, 18916, 19020, 19753, 19851, 19871, 20511 |
| Alcohol dehydrogenase, zinc-binding | 83, 110, 327, 1163, 1183, 1419, 1422, 2031, 2838, 2913, 3141, 3403, 3748, 4242, 10399, 10569, 11280, 14390, 16133, 17965, 20511 |
| Alcohol dehydrogenase, zinc-containing | 83, 110, 1210, 1422, 4242, 6019, 14523, 15795, 15798, 19871 |
| Alcohol oxidase | 577 |
| Aldehyde dehydrogenase | 21, 26, 28, 54, 118, 314, 339, 532, 722, 1147, 1161, 1324, 1347, 1497, 1572, 1649, 1838, 2098, 3278, 3350, 3497, 3917, 5953, 6063, 7013, 7486, 7491, 7680, 8271, 9738, 10508, 12243, 13169, 13277, 13530, 13823, 14053, 14228, 14736, 15421, 16146, 17830, 18798, 19830, 20548 |
| Aldehyde dehydrogenase NAD(P)-dependent | 532 |
| Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead | 557, 654, 2733 |
| Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding | 654, 2390, 16984 |
| Aldo/keto reductase | 13, 32, 126, 233, 562, 743, 960, 1537, 1562, 2041, 2097, 3000, 3026, 3471, 4193, 5014, 5304, 7963, 8073, 10043, 10574, 12249, 15616, 16192, 17195, 18930, 19520, 19827, 20303, 20887 |
| Aldose 1-epimerase | 489, 559, 2819, 13094, 17519 |
| ALG3 | 5416, 10963, 11942 |
| ALG6, ALG8 glycosyltransferase | 4408, 9706, 10202 |
| Alg9-like mannosyltransferase | 2901, 6824, 9636, 10031, 12132 |
| Alkaline phosphatase | 3136, 11670 |
| Alkaline phytoceramidase | 1527, 2498, 4785, 5311, 17127 |
| Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen | 558, 1202, 3808, 19846 |
| Allene oxide cyclase | 2013, 19226, 20515 |
| Allergen V5/Tpx-1 related | 15, 189, 14328 |
| Allinase, C-terminal | 1062 |
| Alpha 1,4-glycosyltransferase conserved region | 139, 7202, 10150 |
| Alpha amylase, catalytic region | 399, 750, 1494, 4515, 11188, 16285, 20940 |
| Alpha amylase, catalytic subdomain | 750 |
| Alpha tubulin | 0, 10854 |
| Alpha-1,4-glucan-protein synthase (UDP-forming) | 121, 13209, 17615 |
| Alpha-1,6-glucosidases, pullulanase-type | 4515 |
| Alpha-amylase beta-sheet, C-terminal | 399, 16285, 17610, 20418, 20940 |
| Alpha-conotoxin | 5268 |
| Alpha-helical ferredoxin | 1344, 1770, 7583 |
| Alpha-hydroxy acid dehydrogenase, FMN-dependent | 299 |
| Alpha-isopropylmalate/homocitrate synthase | 1304, 9099, 17382 |
| Alpha-L-arabinofuranosidase, C-terminal | 1074, 8595 |
| Alpha-N-acetylglucosaminidase | 1598, 9650, 12405, 14513 |
| Alpha/beta hydrolase | 194, 250, 382, 1173, 2703, 2806, 3017, 3051, 3077, 3830, 4109, 6790, 6926, 8711, 10312, 11546 |
| Alpha/beta hydrolase fold-1 | 194, 250, 382, 432, 822, 885, 1173, 1655, 2350, 2703, 2806, 2820, 2989, 3017, 3051, 3061, 3077, 3175, 3391, 3830, 4109, 4320, 5521, 6619, 6790, 6926, 8376, 8711, 8713, 9122, 10107, 10217, 10227, 10305, 10312, 10636, 11050, 11060, 11313, 11546, 11953, 12125, 13894, 14954, 17347, 18297, 19008, 19920 |
| Alpha/beta hydrolase fold-3 | 373, 796, 2119, 2193, 2367, 5623, 6864, 7660, 7832, 8426, 8658, 9334, 9736, 10216, 10958, 16851, 17704 |
| Alpha/gamma adaptin, C-terminal | 1046, 2155, 8757 |
| Alternative oxidase | 1138, 3252, 11100, 12952, 13658, 21770 |
| Aluminium resistance | 12306 |
| Amidase | 1030, 1379, 3303, 3476, 4516, 7141, 8104, 8637, 8835, 9147, 10038, 10224, 15017, 20527 |
| Amidase, hydantoinase/carbamoylase | 1900 |
| Amidohydrolase 1 | 2477, 2576, 3006, 4410, 5445, 11405, 12178, 13377, 19620 |
| Amidohydrolase 2 | 2044, 3587, 9789, 9876 |
| Amidophosphoribosyl transferase | 1764, 14859 |
| Amine oxidase | 549, 1255, 1756, 1875, 2173, 2388, 2716, 2840, 3043, 3290, 4890, 9259, 9427, 9805, 10682, 11441, 11601, 11998, 12731, 13160, 13185, 14066, 14715, 16163, 19205, 21781, 22049 |
| Amino acid permease | 1490, 18423 |
| Amino acid permease-associated region | 371, 1177, 1490, 2446, 18423 |
| Amino acid transporter, transmembrane | 249, 651, 738, 810, 1083, 1454, 1953, 2464, 3500, 7083, 9489, 9655, 9944, 11785, 12622, 14009, 14027, 15856, 17627, 17643, 18446, 19709 |
| Amino acid-binding ACT | 154, 585, 600, 639, 1803, 1890, 2725, 2865, 8052, 8097, 9760, 11309, 14435, 17534 |
| Amino acid/polyamine transporter I | 371, 1177, 1490, 6632, 8325, 10412, 14428, 16433, 18132, 18423, 21975 |
| Amino acid/polyamine transporter II | 249, 651, 738, 810, 1083, 1454, 1953, 2464, 3500, 5736, 7083, 9489, 9655, 9944, 11785, 12622, 14009, 14027, 14521, 15758, 15856, 18446 |
| Aminoacyl-transfer RNA synthetase, class II | 873, 902, 1071, 1357, 1487, 1853, 2551, 2739, 3738, 4302, 4337, 5406, 10718, 13276, 20003 |
| Aminoacyl-tRNA synthetase, class 1a, anticodon-binding | 671, 1541, 1843, 1965, 3497, 3525, 3993, 4362, 6878, 9976, 10145, 10985, 12072, 13651, 16388 |
| Aminoacyl-tRNA synthetase, class I | 26, 437, 1111, 1303, 1375, 1541, 1614, 1843, 1925, 2018, 2220, 2232, 2872, 3240, 3993, 5599, 6041, 7896, 8048, 9045, 9674, 9691, 12679, 12731, 13159, 19894, 19900, 21584 |
| Aminoacyl-tRNA synthetase, class Ia | 1541, 1965, 3497, 3993, 9976, 10985, 12679, 13651, 17715, 19479, 19894, 19900 |
| Aminoacyl-tRNA synthetase, class Ib | 1297, 2220, 2872, 5599, 14919, 20193 |
| Aminoglycoside phosphotransferase | 2164, 2339, 5099, 11051 |
| Aminotransferase class-III | 821, 975, 1920, 2162, 2753, 7474, 12786, 16255, 16499, 17340, 17426, 19073, 19728, 20975 |
| Aminotransferase, class I and II | 63, 252, 620, 740, 1551, 1592, 1697, 1781, 2240, 2762, 3118, 4528, 13407, 14983, 17682, 18136, 19757, 20247, 20401 |
| Aminotransferase, class IV | 632, 2201, 2542, 6365, 12571, 19085, 19763, 19928, 20628 |
| Aminotransferase, class V | 1369, 1888, 2075, 3143, 7351, 9228, 9253, 10389, 11480, 12999, 13176 |
| Aminotransferase, class-II | 71, 166, 736, 2733, 3118, 3328, 4405, 6671, 10923, 11163, 15376 |
| Aminotransferases class-I pyridoxal-phosphate-binding site | 63, 620, 740, 1697, 1781, 2762, 6976 |
| AMMECR1 | 2265, 19074 |
| Ammonium transporter | 1400, 1449 |
| AMP-dependent synthetase and ligase | 82, 123, 227, 267, 719, 833, 1139, 1213, 1431, 2110, 5116, 8018, 8232, 9570, 9857, 10002, 11352, 11386, 12670, 13056, 13217, 16672, 17524, 17720, 18191, 18859, 19127, 19621 |
| Anaphase-promoting complex subunit 10 | 4138 |
| Anaphylatoxin/fibulin | 1880 |
| Anemonia sulcata toxin III | 8034 |
| Animal haem peroxidase | 2944, 9314, 13295 |
| Anion-transporting ATPase | 2968, 3284, 6494, 16552, 18982, 20521 |
| Ankyrin | 97, 156, 224, 270, 315, 464, 509, 595, 696, 905, 1166, 1214, 1285, 1719, 1736, 1949, 1955, 1986, 2234, 2792, 2965, 3055, 3076, 3160, 3370, 3387, 3486, 3503, 3762, 4348, 4417, 4842, 5057, 5215, 5346, 5514, 5842, 5891, 6220, 6468, 6723, 6876, 6928, 6993, 7443, 8019, 8058, 8222, 8308, 8346, 8371, 8594, 8678, 9127, 9219, 9607, 10028, 10083, 10084, 10188, 10273, 10342, 10376, 10404, 10646, 10674, 11371, 11399, 11883, 12044, 12693, 12918, 13030, 13536, 13791, 13834, 14093, 14135, 15513, 15969, 17002, 17305, 17339, 17810, 17997, 18027, 18202, 18645, 18815, 19001, 19018, 19670, 19711, 21007, 21667, 21711, 22031 |
| Annexin | 211, 2093, 13752, 15595, 15716, 15998, 17068 |
| Annexin, type plant | 211 |
| ANTH | 573, 1633, 5299, 12563 |
| Anthranilate phosphoribosyl transferase | 3231 |
| Anthranilate synthase component I and chorismate binding protein | 1502, 4878, 11551 |
| Anthranilate synthase component I, N-terminal | 1502, 11551 |
| Anthranilate synthase component II/delta crystallin | 1502, 1783, 2133, 4113 |
| Anti-sense to fibroblast growth factor protein GFG | 1441 |
| Anti-silencing protein, ASF1-like | 3371 |
| Anticodon-binding | 883, 902, 1357, 4337, 9531, 15178, 18037, 18775, 20836 |
| Antihaemostatic protein | 177, 1604, 6496, 14856, 14917, 20214 |
| AP endonuclease, family 1 | 3893 |
| AP2 clathrin adaptor, alpha and beta chain, appendage | 974, 1302, 2155, 7895, 14781, 22029 |
| ApaG | 5800, 8298, 12916 |
| Aph-1 | 4584 |
| Apolipoprotein A1/A4/E | 8135 |
| Apolipoprotein D | 1903 |
| Apoptosis inhibitory 5 | 2911, 6232, 6811, 7409, 8078, 10061, 10616, 16290, 16872, 17911 |
| Apoptosis regulator Bcl-2 protein, BAG | 1428, 7535, 10924, 11013, 11659 |
| Apple-like | 15, 50, 1617, 2021, 8810, 20547, 21897 |
| Appr-1-p processing | 2416, 4000, 21190 |
| Appr>p cyclic nucleotide phosphodiesterase | 1942, 4924, 6952, 8358 |
| Aquaporin | 26, 68, 436, 2160 |
| Arabidopsis conserved protein | 4245, 7325, 10500, 17718, 20459 |
| Arabidopsis phospholipase-like | 11683, 12219, 17308 |
| Arabidopsis thaliana 130.7kDa hypothetical protein | 1631, 8105, 8206, 9866, 11936 |
| Arabidopsis thaliana cystatin-related protein | 14662, 17220, 21106 |
| AraC protein, arabinose-binding/dimerisation | 2141 |
| Arf GTPase activating protein | 1122, 1149, 2835, 3280, 8058, 8502, 9021, 11938 |
| ARF/SAR superfamily | 12, 572, 1250, 4166, 5247, 9529, 11457, 12704, 13735, 15599, 17433, 17934, 19181, 19783, 20096, 21892 |
| ArgE/dapE/ACY1/CPG2/yscS | 955, 1044, 1900, 4577, 17028, 19630, 21167 |
| Arginase/agmatinase/formiminoglutamase | 167, 423, 876, 2270, 20898 |
| Arginine biosynthesis protein ArgJ | 2397, 17530 |
| Arginine decarboxylase | 906 |
| Arginine-tRNA-protein transferase, C-terminal | 3772 |
| Arginine-tRNA-protein transferase, N-terminal | 3772 |
| Argininosuccinate lyase | 2946 |
| Argininosuccinate synthase | 1690, 17609 |
| Arginyl tRNA synthetase, N-terminal | 1843, 3772, 13159 |
| Arginyl-tRNA synthetase, class Ic | 1843, 13159 |
| Argonaute and Dicer protein, PAZ | 115, 861 |
| Armadillo | 237, 443, 1318, 2153, 2184, 2366, 2556, 2780, 2809, 3040, 3377, 4812, 5218, 5708, 5993, 6525, 6762, 7158, 7199, 7489, 7669, 7823, 7963, 8067, 8164, 8204, 8444, 8554, 8753, 8784, 8866, 9347, 9778, 9807, 10469, 10933, 10980, 11083, 11412, 11978, 12115, 13346, 13650, 13946, 14230, 15661, 15980, 16629, 20435, 21031, 21826 |
| Aromatic amino acid beta-eliminating lyase/threonine aldolase | 1637 |
| Aromatic amino acid permease | 5736, 14521, 15758 |
| Aromatic-L-amino-acid decarboxylase | 942 |
| Aromatic-ring hydroxylase | 808, 1756, 2473, 3536, 3965, 6082, 8044, 9073, 9259 |
| ARP2/3 complex 16 kDa subunit (p16-Arc) | 4933 |
| ARP2/3 complex, 21 kDa p21-Arc subunit | 3214 |
| Arp2/3 complex, 34kDa subunit p34-Arc | 3063 |
| ARP23 complex 20 kDa subunit | 4830 |
| Arthropod hemocyanin/insect LSP | 720 |
| Arv1-like protein | 6552, 18054 |
| Asp/Glu racemase | 2410, 3201, 3659, 6781, 7529, 7804, 16566 |
| Asparaginase/glutaminase | 998, 2090 |
| Asparagine synthase | 435, 14277 |
| Asparagine synthase, glutamine-hydrolyzing | 435 |
| Asparaginyl-tRNA synthetase, class IIb | 873 |
| Aspartate carbamoyltransferase | 3718 |
| Aspartate decarboxylase-like fold | 204, 1738, 11514, 11921, 12632, 19298 |
| Aspartate kinase | 1890 |
| Aspartate kinase region | 1890, 10830, 13210, 16719 |
| Aspartate-semialdehyde dehydrogenase | 3370 |
| Aspartate-semialdehyde dehydrogenase, USG-1 related | 3370 |
| Aspartate/glutamate/uridylate kinase | 928, 1890, 2065, 2156, 3345, 5842, 10830, 10895, 13210, 13252, 14832, 16358, 16719, 17474, 20583 |
| Aspartate/ornithine carbamoyltransferase | 2453, 3718 |
| Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region | 2453, 3718 |
| Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain | 2453, 3718 |
| Aspartate/other aminotransferase | 63, 18136 |
| Aspartic acid and asparagine hydroxylation site | 151, 552, 1385, 8043, 16524 |
| Aspartyl-tRNA synthetase, class IIb | 873, 1071, 8771 |
| AT-rich interaction region | 2282, 6561, 8185, 8300, 12029 |
| Ataxin-2, C-terminal | 493, 1101, 6916, 8101, 9514, 18670 |
| Ataxin-2, N-terminal | 4001 |
| ATP citrate synthase, small subunit | 608 |
| ATP dependent DNA ligase, C-terminal | 2272, 11886, 12814 |
| ATP dependent DNA ligase, central | 2272, 11886 |
| ATP synthase F0, C subunit | 6273 |
| ATP synthase F1, alpha subunit | 1306 |
| ATP synthase F1, beta subunit | 157, 19579 |
| ATP synthase subunit H | 8137 |
| ATP synthase V-type, B subunit | 669 |
| ATP-binding region, ATPase-like | 683, 923, 1676, 3096, 3341, 6568, 6607, 6988, 7971, 8108, 9330, 9713, 12949, 14190, 14958, 20078 |
| ATP-citrate lyase/succinyl-CoA ligase | 831, 1437, 1702, 13331, 19585 |
| ATP-cone | 1535, 11370 |
| ATP-dependent carboxylate-amine ligase-like, ATP-grasp | 4552, 11231 |
| ATP-dependent Clp protease adaptor protein ClpS | 3311, 10387, 19513 |
| ATP-dependent DNA helicase RecQ | 1889, 15535, 15862, 19987 |
| ATP-dependent DNA ligase | 80, 93, 487, 2272, 11886, 12814, 13974, 15853 |
| ATP-dependent helicase, DEAD-box | 46, 112, 181, 872, 1147, 1376, 1501, 1868, 1990, 2214, 5697, 5801, 14021 |
| ATP-dependent helicase, DEAH-box | 1889, 5419, 10156 |
| ATP-grasp fold | 1024, 1437, 2196, 2575, 2650, 4552, 11231 |
| ATP-NAD/AcoX kinase | 2737, 4220, 10832 |
| ATP-sulfurylase | 1067 |
| ATP10 | 5500 |
| ATP11 | 4483 |
| ATP12 ATPase | 4425 |
| ATPase AAA-2 | 203, 1090, 1942, 7417, 10085, 20157 |
| ATPase associated with various cellular activities, AAA-5 | 6246, 14072 |
| ATPase subunit 8, plant | 7475 |
| ATPase, BadF/BadG/BcrA/BcrD type | 8560 |
| ATPase, E1-E2 type | 99, 180, 273, 784, 1061, 1495, 2217, 2654, 3079, 8056, 8583, 8691, 9024, 9621, 10245, 12542, 13431, 14408, 15688, 15941, 16518, 17417, 17568, 17757, 17815, 17832, 18024, 18440, 19130, 19553, 20277, 20833 |
| Atrophin | 1086 |
| Autophagocytosis associated protein, C-terminal | 2969, 11991 |
| Autophagocytosis associated protein, N-terminal | 2969 |
| Autophagy protein Apg12 | 5768 |
| Autophagy protein Apg5 | 6375 |
| Autophagy protein Apg6 | 3100, 11003 |
| Autophagy protein Apg9 | 4045, 13372, 16370, 18157, 19696 |
| AUX/IAA protein | 59, 207, 2064, 7191, 8701, 8716, 9231, 10249, 11191, 12272, 12950, 13151, 13175, 13383, 13469, 13792, 14469, 16793, 17613, 20059, 20218, 20486, 21578, 22087 |
| Aux/IAA_ARF_dimerisation | 59, 207, 1359, 2064, 7191, 8701, 8716, 9231, 10249, 11191, 11889, 12272, 13129, 13151, 13383, 13469, 13792, 14469, 16793, 17104, 17613, 18088, 20059, 20486, 21578, 21714 |
| Auxin Efflux Carrier | 512, 1222, 1987, 11185, 11210, 13027, 13406, 13687, 17912, 18120 |
| Auxin response factor | 207, 13836 |
| Auxin responsive SAUR protein | 1360, 3016, 3533, 4791, 6177, 6665, 6967, 7175, 7435, 8521, 8628, 8674, 8710, 9487, 10021, 10134, 11985, 12357, 12490, 13101, 15397, 16506, 16795, 16883, 17129, 17309, 18196, 19278, 20644, 21819, 21867 |
| Auxin-binding protein | 4471 |
| AWPM-19-like | 1387, 14382, 19551 |
| AWS | 4285, 6707 |
| B repeat unit of collagen binding surface protein (cna) | 3968 |
| B-cell receptor-associated 31-like | 7017, 10809 |
| B-class P450 | 2077, 16177 |
| B12D | 768, 15253, 18154, 21961 |
| B3/4 | 1891 |
| Bacterial adhesion | 1023 |
| Bacterial bifunctional deaminase-reductase, C-terminal | 5440, 13361, 14288 |
| Bacterial DNA topoisomerase I | 4289 |
| Bacterial enterotoxin | 508, 6820, 7314 |
| Bacterial extracellular solute-binding protein, family 3 | 2027, 2188, 7888 |
| Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p | 2206, 3299, 4447, 6155, 9058, 9125, 14104, 14411, 14555 |
| Bacterial immunoglobulin/albumin-binding | 295 |
| Bacterial methyltransferase | 6303, 16274 |
| Bacterial NusG ribosomal protein | 2159 |
| Bacterial periplasmic spermidine/putrescine-binding protein | 6545 |
| Bacterial regulatory factor, effector | 4594 |
| Bacterial regulatory protein, LacI | 2736 |
| Bacterial regulatory protein, LuxR | 6618, 12791 |
| Bacterial rhodopsin | 16336 |
| Bacterial ribosomal protein S3 | 4828 |
| Bacterial ring hydroxylating dioxygenase, alpha subunit | 2733, 4118 |
| Bacterial sec-independent translocation protein mttA/Hcf106 | 7229, 8303, 13586 |
| Bacterial surface antigen (D15) | 1951, 1991, 5642, 6394, 8564, 9691, 10417 |
| Bacterial transcription antitermination protein NusG | 9002, 11816 |
| Bacterial transferase hexapeptide repeat | 184, 316, 886, 921, 957, 1063, 1960, 3018, 7162, 7269, 9517, 10378 |
| Bacterial transketolase | 596 |
| Bacterial trigger factor, C-terminal | 3575 |
| Bacterial trigger factor, N-terminal | 3575 |
| Bacteriophage lambda tail assembly I | 18424 |
| Band 4.1 | 3904, 21741 |
| Band 7 protein | 338, 499, 3205, 3986, 8140, 12180, 12532 |
| Barren | 6132, 21011 |
| Barwin | 801, 19601 |
| Barwin-related endoglucanase | 78, 178, 586, 801, 4670, 5380, 9975, 15827, 19601, 20421 |
| Basic helix-loop-helix dimerisation region bHLH | 535, 806, 1072, 1448, 1707, 1842, 2049, 3083, 3372, 3882, 4159, 4493, 4979, 6025, 6700, 6799, 7081, 8035, 8054, 8221, 8299, 8335, 9182, 9332, 9432, 9757, 9990, 10266, 10464, 10489, 10863, 11019, 11321, 11452, 11497, 11530, 11610, 11777, 12402, 13549, 13653, 13996, 14279, 14363, 16451, 16521, 16526, 16636, 16708, 16986, 18422, 18826, 18922, 20517, 21653, 21926 |
| Basic leucine zipper | 663, 3198, 3410, 4049, 6028, 6550, 7807, 8045, 9213, 9616, 11679, 18703, 20952 |
| Basic-leucine zipper (bZIP) transcription factor | 221, 663, 882, 911, 1065, 1728, 3198, 3410, 4049, 6028, 6182, 6223, 6550, 6860, 6874, 6953, 7807, 8045, 8213, 8601, 9213, 9616, 11679, 12424, 12870, 13498, 17019, 17782, 18703, 19036, 20205, 20952, 21718 |
| Bax inhibitor 1 | 1258 |
| Beige/BEACH | 2517, 5441, 8531, 9497, 10662, 11318 |
| Berberine/berberine-like | 232, 14205, 14394 |
| Bet v I allergen | 368, 453, 935, 1746, 1915, 3122, 5275, 6286, 11090, 12437, 14490, 15037, 15263, 18736, 18876, 21797 |
| Beta tubulin | 0, 16, 1874, 6090, 7663, 9174, 9391, 10770, 11999, 12556 |
| Beta-glucanase | 8, 7571 |
| Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ | 3390 |
| Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ | 3390 |
| Beta-Ig-H3/fasciclin | 418, 634, 956, 2448, 3903, 8180, 12120, 13001, 17439, 19353 |
| Beta-ketoacyl synthase | 429, 14540, 15280, 17619, 21317 |
| Beta-lactamase | 2813, 8446 |
| Beta-lactamase, class A | 2876, 17817, 21856 |
| Beta-lactamase, class B | 2411 |
| Beta-lactamase-like | 2007, 2411, 2979, 3402, 3540, 3629, 5173, 6888, 9158, 11286, 11563, 12983, 16477, 21944 |
| Bifunctional molybdenum cofactor molybdenum incorporation/glycine receptor clustering protein | 2555 |
| Bile acid:sodium symporter | 1524, 9304, 11097, 12129, 13978, 14421, 14963 |
| BING4, C-terminal | 9018 |
| Biopterin transport-related protein BT1 | 2888, 2915, 4252, 6247, 9948, 12961, 13860, 16032, 17038, 19700, 20090 |
| Biotin and thiamin synthesis associated | 2510, 19964 |
| Biotin carboxylase, C-terminal | 1206, 2196, 2650, 9467 |
| Biotin carboxylation region | 2196, 2650, 9467, 16130, 20033 |
| Biotin protein ligase, C-terminal | 4626 |
| Biotin synthase | 2510 |
| Biotin--acetyl-CoA-carboxylase ligase | 4626 |
| Biotin-binding site | 1206, 2196, 2351, 15869 |
| Biotin/lipoate A/B protein ligase | 4626, 5822, 7050 |
| Biotin/lipoyl attachment | 790, 916, 1092, 1206, 2196, 2351, 6347, 7156, 9409, 10755, 15299, 15606, 15869, 18352 |
| Blue (type 1) copper domain | 161, 206, 623, 730, 8936, 13307, 18758, 19802, 21244, 22092 |
| Blue (type 1) copper protein | 623 |
| Blue (type 1) copper subtype | 623 |
| BolA-like protein | 3809, 8093, 8304, 8543 |
| Bombesin-like peptide | 17785 |
| BOP1, N-terminal | 3059, 17807 |
| Borrelia outer surface lipoprotein | 2294, 9134 |
| BP28, C-terminal | 8732 |
| BPG-independent PGAM, N-terminal | 775 |
| Brain and reproductive organ-expressed | 3374 |
| Branched-chain amino acid aminotransferase I | 2542 |
| Branched-chain amino acid aminotransferase II | 632 |
| BRCA1-associated 2 | 3036, 17754 |
| BRCA2 repeat | 7731 |
| BRCT | 2042, 2506, 3400, 4262, 5953, 6750, 7029, 7277, 7433, 7464, 8696, 9143, 11245, 11886, 11919, 12937, 13232, 14090, 14664, 14671, 16671, 17481, 19436, 19992 |
| Breast carcinoma amplified sequence 2 | 4308, 17205 |
| Brix | 2620, 3326, 3441, 3447, 4422, 12509, 19989 |
| BRO1 | 1948, 9669, 10557 |
| Bromo adjacent region | 1537, 2271, 2617, 4965, 6248, 6410, 8923, 13168, 14298, 15138, 15641, 17801, 20784, 21018, 21428 |
| Bromodomain | 1316, 3757, 4340, 4346, 4349, 6335, 10533, 12087, 13426, 15772, 15796, 15966, 20057, 20553 |
| Bromodomain transcription factor | 9200 |
| BSD | 2509, 4481, 6496, 7686, 12200, 15039, 15198, 17013 |
| BTB | 130, 166, 1059, 1260, 1285, 1691, 2068, 2153, 3142, 3442, 3527, 3650, 3762, 4986, 5675, 5860, 5975, 8650, 8778, 9085, 9325, 9583, 9633, 9647, 10084, 11776, 11984, 12377, 13174, 13596, 13671, 15572, 15611, 16634, 17877, 19267, 21136 |
| BTB/Kelch-associated | 1059, 3442 |
| BTB/POZ | 130, 166, 1059, 1260, 1285, 2068, 2153, 3142, 3442, 3650, 3762, 5860, 8650, 8778, 9325, 9583, 9633, 9647, 10084, 11984, 13174, 13596, 13671, 16634, 19267, 21136 |
| Bucentaur or craniofacial development | 5716 |
| BURP | 333, 1307, 1377, 13606, 13692, 18178 |
| Bystin | 4327, 12702, 14879, 19923 |
| bZIP transcription factor, bZIP_1 | 221, 663, 882, 911, 1065, 1728, 3410, 6028, 6223, 6550, 6860, 6874, 7807, 8045, 8213, 8601, 9213, 9616, 12424, 12870, 13498, 17019, 17782, 19036, 20205, 20952 |
| BZR1, transcriptional repressor | 1812, 3383, 12248 |
| C-5 cytosine-specific DNA methylase | 361, 1919, 2271, 4008, 6298, 6499, 12104, 12516, 12613, 16169, 17263, 20319, 21018 |
| C-type lectin | 2023, 4089, 8485, 8915, 9070, 10891, 14605, 14967, 17305 |
| C1-like | 777, 949, 7065, 7721, 10102, 11031, 17232, 18007, 18600, 19160, 20094, 20242 |
| C2 | 170, 270, 593, 934, 1149, 1298, 1318, 1458, 1613, 1625, 2114, 2760, 2990, 3060, 3654, 4593, 5315, 5345, 5539, 5596, 6481, 8067, 8160, 9327, 9476, 9709, 9795, 9868, 9935, 10681, 10820, 11189, 13322, 14299, 14824, 16686, 17043, 17235, 17335, 17743, 21800 |
| C2 calcium/lipid-binding region, CaLB | 170, 270, 593, 934, 1149, 1298, 1318, 1458, 1613, 1625, 2114, 2293, 2533, 2760, 2990, 3060, 3654, 3800, 4593, 5315, 5345, 5539, 5596, 6481, 7749, 8067, 8160, 9020, 9327, 9476, 9795, 9868, 9935, 10681, 10725, 10820, 11189, 12840, 13322, 14299, 14752, 14824, 14924, 15415, 16686, 16910, 17043, 17235, 17335, 17743, 17795, 19391, 21024, 21049, 21800 |
| C4-dicarboxylate transporter/malic acid transport protein | 2138, 15891, 18413 |
| Ca2+/Na+ channel, pore region | 2624, 16406 |
| Calcium-binding EF-hand | 17, 23, 46, 59, 67, 123, 164, 267, 279, 308, 352, 393, 403, 405, 420, 573, 587, 677, 828, 1109, 1191, 1198, 1290, 1475, 1528, 1671, 1791, 1827, 1874, 2024, 2327, 2481, 2656, 2677, 2682, 2698, 2713, 2848, 2940, 3044, 3306, 3332, 3663, 3760, 3953, 4045, 4185, 4335, 4415, 4953, 5324, 5357, 5434, 5554, 5580, 5583, 5759, 5770, 6418, 6421, 6712, 6953, 6985, 7106, 7138, 7415, 7485, 7654, 7727, 7890, 8082, 8327, 8381, 8438, 8548, 8956, 8966, 8989, 9202, 9217, 9249, 9422, 9525, 9631, 9654, 9685, 9874, 9882, 9935, 9970, 10093, 10211, 10229, 10277, 10385, 10979, 10983, 11021, 11049, 11059, 11448, 11555, 11819, 11859, 12266, 12662, 12990, 13130, 13329, 13605, 14289, 14485, 15153, 15324, 15423, 15548, 16566, 16692, 16744, 16895, 16974, 17192, 17677, 17778, 18083, 18114, 18127, 18140, 18329, 18408, 18681, 18809, 18868, 19261, 19277, 19281, 19323, 19798, 20046, 20281, 20383, 20480, 20938, 20958, 21104, 21933, 22121 |
| Calcium-translocating P-type ATPase, PMCA-type | 180 |
| Calcium/proton exchanger | 773 |
| Calcium/proton exchanger superfamily | 773 |
| Caleosin related | 587 |
| Calmodulin binding protein-like | 437, 15334, 18207 |
| Calmodulin-binding, plant | 7558, 15087 |
| Calponin-like actin-binding | 1342, 2244, 10024, 11407 |
| Calreticulin | 348 |
| Calreticulin/calnexin | 348, 747, 14753, 17843 |
| Calreticulin/calnexin, P | 348, 747 |
| Calycin-like | 423, 482, 1557, 1903, 3041, 5071, 5370, 5506, 7394, 8011, 11790, 12216, 14818, 19291 |
| cAMP response element binding (CREB) protein | 1065, 3410, 6874, 12870, 17782 |
| cAMP-dependent protein kinase | 1555 |
| cAMP-type GPCR | 4861, 12845 |
| Camphor resistance CrcB protein | 10081 |
| CAP protein | 2243, 9745 |
| CAP-Gly | 3746, 11538 |
| CAP160 | 15742 |
| Carbamoyl-phosphate synthase L chain, ATP-binding | 122, 942, 1036, 2196, 2650, 3239, 4975, 7236, 7478, 8114, 8880, 9755, 11407, 12693, 13869 |
| Carbamoyl-phosphate synthase, GATase region | 1502, 1783, 4113 |
| Carbamoyl-phosphate synthase, small chain | 1783 |
| Carbamoyl-phosphate synthetase large chain, N-terminal | 2196, 2650, 16130, 20033 |
| Carbohydrate kinase, FGGY | 161, 1260, 2320, 2687, 2837, 3054, 3350, 9986, 11743, 12315, 14855 |
| Carbohydrate kinase, PfkB | 81, 370, 705, 945, 1988, 1994, 2674, 3242, 3766, 5282, 5848, 8064, 9188, 9295, 11628, 12235, 13427, 17967 |
| Carbohydrate kinase, thermoresistant glucokinase | 6602 |
| Carbohydrate-binding | 77, 401, 1832, 6846 |
| Carbohydrate-binding, CenC-like | 3197, 16229 |
| Carbonic anhydrase, eukaryotic | 1042 |
| Carbonic anhydrase, prokaryotic and plant | 245, 13387, 13597 |
| Carboxyl transferase | 1206, 2360, 6209, 9394, 20944 |
| Carboxylesterase, type B | 373, 3029, 8457 |
| Carboxypeptidase regulatory region | 2492, 15164, 20849 |
| Carotene hydroxylase | 2165, 10090, 10191 |
| Carotenoid oxygenase | 6313, 8010, 16520, 19344 |
| CAS/CSE, C-terminal | 2810, 10201 |
| Casein kinase II, regulatory subunit | 722, 14497, 17064 |
| CASP, C-terminal | 3675, 10328 |
| Caspase, p20 subunit | 975 |
| Catalase | 73, 10524, 19898, 19934 |
| Catalase, N-terminal | 73, 19934 |
| Catalytic domain of components of various dehydrogenase complexes | 916, 1092, 2824, 18116, 19539 |
| Catechol dioxygenase, N-terminal | 21928 |
| Cation channel, non-ligand gated | 2624, 14485 |
| Cation efflux protein | 1060, 2116, 5655, 6144, 9079, 11024, 11056, 13351, 14404, 14765, 19244 |
| Cation transporter | 4966, 21060, 21896 |
| Cation transporting ATPase, C-terminal | 180, 1061, 17202, 17815, 18024, 18440 |
| Cation transporting ATPase, N-terminal | 99, 180, 17832 |
| CBF | 3858, 6968, 9179, 12839, 20287 |
| CBS | 402, 1031, 1238, 1509, 1538, 1939, 2984, 3134, 3259, 4445, 5484, 5833, 6032, 6837, 7172, 7539, 8547, 8840, 9439, 10059, 10256, 10625, 11008, 11358, 11420, 13492, 14281, 15570, 15714, 18293, 19212, 19590, 19921, 20288, 20387 |
| CbxX/CfqX | 204, 1753, 3160 |
| CCAAT-binding transcription factor, subunit B | 878, 7167, 8047, 15418, 22082 |
| CcmE/CycJ protein | 6370 |
| CCR4-Not complex component, Not1 | 2312, 11044, 16087 |
| CCR4-NOT complex, subunits 3 and 5 | 2006 |
| CCT | 224, 517, 1040, 7444, 7636, 8059, 8085, 8096, 10944, 10973, 12085, 12535, 13255, 14200, 15154, 15778, 16523, 16693, 16696, 16804, 17833, 18713, 21148 |
| CD9/CD37/CD63 antigen | 306, 7863, 11940, 14304, 20437 |
| Cdc20/Fizzy | 708, 18954 |
| Cdc23 | 9520 |
| CDC45-like protein | 15782 |
| Cdk-activating kinase assembly factor (MAT1) | 6168, 15249 |
| CDP-alcohol phosphatidyltransferase | 2496, 2639, 3202, 5185, 13619, 14851, 17079 |
| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | 2639 |
| Cecropin | 3670, 21009 |
| Cell differentiation proteins, Rcd1-like | 1125, 11834 |
| Cell division protein FtsZ | 1036, 16626 |
| Cell division/GTP binding protein | 16933 |
| Cell surface antigen | 4288 |
| Cellular retinaldehyde binding/alpha-tocopherol transport | 376 |
| Cellular retinaldehyde-binding/triple function, C-terminal | 376, 891, 939, 1576, 1580, 1672, 2416, 3204, 4034, 6123, 6470, 6808, 7331, 8902, 9038, 11362, 12527, 12666, 14108, 15700, 17397 |
| Cellular retinaldehyde-binding/triple function, N-terminal | 376, 891, 939, 1576, 1672, 6808, 17546, 17582, 17600 |
| Cellulose synthase | 32, 2341, 4102, 8250, 11722, 12875, 17462, 17973, 18188 |
| CemA | 5948, 7294 |
| Centromerekinetochore Zw10 | 3423, 13730, 14854, 16425 |
| Cereal seed allergen, trypsin/alpha-amylase inhibitor | 1867, 4241, 4671, 5451, 6030, 6435, 22103 |
| Cereal trypsin/alpha-amylase inhibitor | 1867, 4241, 6030, 6435, 22103 |
| CG-1 | 13285, 19648 |
| ChaC-like protein | 1263 |
| Chalcone and stilbene synthases, C-terminal | 84, 128, 14814, 18199 |
| Chalcone and stilbene synthases, N-terminal | 84, 128, 17758, 18391 |
| Chalcone-flavanone isomerase | 1699, 2230 |
| Chaperone DnaJ | 1393 |
| Chaperone DnaJ, C-terminal | 116, 329, 1393, 1675, 3320, 13508, 14088 |
| Chaperonin clpA/B | 203, 335, 1942, 8842, 10085 |
| Chaperonin Cpn10 | 798, 1567, 2822, 18144, 19158, 19956, 20980 |
| Chaperonin Cpn60 | 71, 187, 438, 741, 1394, 1554, 5080, 8143, 12701, 16787, 17448, 18526, 19442, 20031 |
| Chaperonin Cpn60/TCP-1 | 71, 438, 524, 741, 1170, 1394, 1554, 1621, 2214, 2814, 9723, 11132, 11573, 12492, 12701, 13884, 14146, 14528, 14962, 15289, 16157, 17448, 18329, 19442, 19954, 20031, 20533, 20555, 20978 |
| chaperonin GroEL | 71 |
| Chaperonin TCP-1 | 438, 741, 1394, 1554, 1621, 15466, 17448, 19442 |
| CHASE | 12218, 16236 |
| CHCH | 731, 3012, 4318, 5911, 6353, 9995 |
| Checkpoint protein Rad24 | 13813 |
| CheY-like | 697, 923, 1116, 1627, 6568, 6607, 7227, 7971, 8108, 9013, 13485, 15982, 16376, 16544, 16801, 17281, 17471, 18594, 19807 |
| Chitin-binding, type 1 | 108, 801, 6444, 7069, 8523, 14011, 18981, 22044 |
| Chitinase II | 2296, 4657 |
| Chloramphenicol acetyltransferase | 6423 |
| Chloride channel plant CLC | 402 |
| Chlorophyll A-B binding protein | 4, 217, 441, 551, 556, 561, 797, 1091, 1647, 8254, 10039, 11249, 12657, 13352, 14953, 15643, 16110, 17479, 19515, 19948, 20550, 20804 |
| Chlorophyllase | 2836 |
| Chloroplast protein import component Toc34 | 1885 |
| Chloroplast Ycf2 | 4532, 11291, 11719, 12461, 16976, 20315 |
| Choline kinase, N-terminal | 1530, 13892 |
| Choline/ethanolamine kinase | 1530, 2530, 13892, 17621 |
| CHORD | 4232, 19575 |
| Chorismate mutase | 1293, 18214 |
| Chorismate mutase of the AroQ class, eukaryotic type | 1293 |
| Chorismate synthase | 657, 1839, 14961 |
| Chromatin SPT2 | 12278, 14365, 15281, 19274 |
| Chromo | 20, 2580, 3147, 6018, 7638, 8540, 9067, 9129, 10967, 11155, 12332, 15657, 18620, 18852 |
| Chromo shadow | 8540 |
| Citrate synthase | 1224, 1433, 16494 |
| Citrate transporter | 2478, 3491, 8549 |
| Citron-like | 8334 |
| Cl- channel, voltage gated | 402, 1939, 12468, 13492, 18293 |
| Class I aminoacyl-tRNA synthetase, anticodon-binding | 3240, 20327 |
| Class I peptide chain release factor | 4943, 5431, 5531, 10160, 10969, 14874, 15165, 19968 |
| Class II aldolase/adducin, N-terminal | 1450, 8252 |
| Clathrin adaptor complex, medium chain | 839, 1395, 1859, 2392, 3600, 9234, 9728, 9799, 11140, 12534, 12689 |
| Clathrin adaptor complex, small chain | 599, 1041, 15696, 17707 |
| Clathrin light chain | 1320, 13983 |
| Clathrin propeller, N-terminal | 9393 |
| Claudin tight junction protein | 665, 951 |
| Cleft lip and palate transmembrane 1 | 2461, 19897 |
| Clp, N terminal | 203, 2290, 2396, 7417, 15990 |
| ClpX, ATPase regulatory subunit | 1090 |
| CMP/dCMP deaminase, zinc-binding | 1550, 2260, 5440, 6049, 6260, 6493, 6770, 7013, 14288, 15181, 17828 |
| CO dehydrogenase flavoprotein, C-terminal | 654, 13531 |
| Co-chaperone Hsc20 | 5854, 19850 |
| CoA-binding | 1702 |
| Coagulation factor 5/8 type, C-terminal | 3442, 12598, 14801 |
| Coatomer alpha subunit, C-terminal | 772, 15290 |
| Coatomer epsilon subunit | 1430 |
| Coatomer WD associated region | 542, 772, 15660 |
| Cobalamin (vitamin B12) biosynthesis CbiX | 3937, 14487, 15677 |
| Cobalamin (vitamin B12) biosynthesis CobW, C-terminal | 3213, 9464, 10997 |
| Cobalamin (vitamin B12) biosynthesis P47K | 2314, 3213, 3360, 13921, 15652 |
| Cobalt transport protein | 9421 |
| CobN/magnesium chelatase | 1399 |
| Cobyrinic acid a,c-diamide synthase | 2890, 4971 |
| Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal | 11151 |
| Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal | 3812 |
| Coenzyme Q biosynthesis Coq4 | 4597, 19631 |
| Cof protein | 784, 2217, 8691, 13431 |
| Cofactor-independent phosphoglycerate mutase, archaeal | 4293 |
| Cofactor-independent phosphoglycerate mutase/phosphopentomutase | 4293 |
| COG complex component, COG2 | 2389, 11365, 13939, 17056, 20501 |
| COG4 transport | 2519, 10466 |
| Cold acclimation WCOR413 | 1493, 3608, 17354, 17374 |
| Cold shock protein | 1075, 15210 |
| Cold shock, CspA | 15210 |
| Cold-shock protein, DNA-binding | 1075, 15210 |
| Colicin E3, catalytic | 2235 |
| Colon cancer-associated Mic1-like | 8480 |
| Complex 1 LYR protein | 1383, 3607, 3778, 4535, 6138, 6777, 7576, 7773, 11181, 13261, 14643, 17297, 19087 |
| Concanavalin A-like lectin/glucanase | 8, 81, 103, 348, 404, 747, 876, 1180, 1365, 2016, 2517, 2669, 5968, 6830, 7047, 7571, 8043, 9180, 10238, 10648, 11018, 11318, 11741, 12074, 12698, 12714, 13773, 14753, 15014, 15396, 15467, 16080, 16360, 16973, 18015, 18817, 18964, 19347, 19510, 19528, 20027, 20829, 21663, 21769 |
| Conserved hypothetical protein 103 | 3261, 15841 |
| Conserved hypothetical protein 1563 | 8869, 9228 |
| Conserved hypothetical protein 1589, plant | 2623, 2751, 3304, 8809, 10512, 17246, 21719 |
| Conserved hypothetical protein 2058 | 5563 |
| Conserved hypothetical protein 245 | 4857 |
| Conserved hypothetical protein 730 | 548, 9372, 18193 |
| Conserved hypothetical protein 91 | 5264 |
| Conserved hypothetical protein 95 | 8930 |
| Conserved hypothetical protein CHP02464 | 5440, 13361 |
| Conserved hypothetical protein, YfcH | 2987, 16220 |
| Conserved oligomeric complex COG6 | 2996, 8514 |
| Copine | 501, 1613 |
| Copper amine oxidase | 1735, 2957, 11458, 15262, 17331, 20774 |
| Copper center Cu(A) | 3516 |
| Copper-transporting ATPase | 784 |
| Copper-transporting ATPase 1 | 15941 |
| Coproporphyrinogen III oxidase | 1787, 12408 |
| Cornichon | 2015, 2615, 18060 |
| CPSF A subunit, C-terminal | 1708, 2112, 3742, 9679, 10805, 16997 |
| CS | 1081, 1256, 1984, 3187, 4374, 11543, 18904 |
| CT11-RanBPM | 2111, 2408, 2948, 4235, 5478, 12707 |
| CT20 | 6104 |
| CTLH, C-terminal to LisH motif | 1444, 2111, 2408, 2948, 3549, 4235, 5478, 6821, 6955, 9268, 9758, 12621 |
| CTP synthase | 569, 19441 |
| Ctr copper transporter | 3427, 3478 |
| CUB | 11168 |
| Cullin | 578, 1337, 1917, 11378, 12096, 12427, 13616, 14043, 16561 |
| Cupin 1 | 98, 102, 860, 919, 1019, 1869, 2055, 3904, 4671, 5400, 8314, 10044, 10430, 12367, 13475, 13686, 14881, 15870, 16153, 17087, 18814, 19215, 20095, 20139 |
| Cupin 2, conserved barrel | 98, 3529, 3756, 17333, 18384 |
| Cupin 4 | 2789, 14473, 17631 |
| Cupin region | 98, 102, 860, 1019, 1096, 1869, 2789, 3756, 3904, 4471, 5400, 6614, 10430, 12367, 13475, 13686, 14473, 17087, 17333 |
| Cupin, RmlC-type | 98, 102, 295, 307, 527, 860, 919, 1019, 1096, 1443, 1775, 1869, 2055, 2124, 2141, 2355, 2653, 3529, 3756, 3904, 4471, 4671, 5400, 6380, 6551, 8314, 9132, 9832, 10044, 10430, 12367, 13475, 13686, 14881, 15870, 16153, 17087, 17140, 17333, 18331, 18384, 18814, 19215, 20095, 20139 |
| Cupredoxin | 87, 94, 206, 239, 591, 623, 730, 1579, 2062, 3516, 4450, 5384, 5385, 5617, 5722, 5950, 6839, 7075, 7938, 8936, 9086, 9848, 9913, 10170, 11586, 11647, 12692, 13307, 13479, 13749, 14760, 15100, 15727, 16181, 16427, 16466, 17074, 18242, 18758, 18935, 19045, 19629, 19645, 19802, 20660, 21244, 21729, 22092 |
| Curculin-like (mannose-binding) lectin | 15, 481, 1617, 1727, 2021, 9779, 11706, 14419, 14678, 15855, 16569, 16928, 18398 |
| CutA1 divalent ion tolerance protein | 2908 |
| CW | 21897 |
| Cwf15/Cwc15 cell cycle control protein | 2063 |
| Cyanase | 3401 |
| Cyanate lyase, C-terminal | 3401 |
| Cyclase-associated protein | 2243, 6159, 8126, 9745 |
| Cyclic nucleotide-binding | 134, 696, 1555, 3166, 4031, 10168 |
| Cyclin | 717, 960, 1162, 1300, 1374, 1481, 2786, 4181, 5049, 6768, 6911, 12884 |
| Cyclin, C-terminal | 717, 960, 1300, 1374, 12820, 12884 |
| Cyclin, N-terminal | 717, 960, 1011, 1162, 1300, 1374, 2786, 4181, 5049, 12884, 20198 |
| Cyclin-dependent kinase inhibitor | 6008, 11447, 17349, 20405, 21312 |
| Cyclin-dependent kinase, regulatory subunit | 2856, 17732 |
| Cyclin-like | 717, 960, 1011, 1162, 1300, 1374, 1481, 2786, 4181, 5049, 6768, 6911, 8041, 8145, 10159, 11699, 11720, 11870, 12820, 12884, 13418, 14265, 14454, 15783, 15849, 17167, 17860, 20198, 20471, 21335 |
| Cyclin-like F-box | 81, 200, 501, 843, 849, 895, 952, 973, 1078, 1144, 1155, 1404, 1439, 1600, 1752, 1932, 2140, 2148, 2149, 2186, 2289, 2297, 2406, 2548, 2787, 2859, 3027, 3413, 3732, 3876, 4115, 4251, 4647, 4840, 4905, 5018, 5106, 5125, 5175, 5286, 5287, 5398, 5455, 5461, 5678, 5733, 5744, 5852, 5902, 5940, 6029, 6296, 6459, 6559, 6565, 6593, 6786, 6812, 6937, 7222, 7334, 7342, 7403, 7436, 7449, 7470, 7473, 7546, 7582, 7623, 7629, 7641, 7748, 7763, 7772, 7786, 7805, 7858, 7894, 7933, 8117, 8258, 8298, 8306, 8378, 8432, 8635, 8653, 8668, 8687, 8688, 8730, 8845, 9044, 9091, 9245, 9473, 9599, 9957, 9967, 9979, 9996, 10048, 10050, 10073, 10120, 10288, 10298, 10333, 10344, 10534, 10788, 10793, 10913, 11103, 11422, 11500, 11909, 12113, 12155, 12192, 12426, 12796, 12873, 12888, 12891, 12896, 12955, 12960, 13002, 13100, 13143, 13525, 13531, 13532, 13534, 13806, 13808, 13841, 13938, 14201, 14225, 14250, 14251, 14311, 14343, 14453, 14665, 14674, 14675, 14784, 15097, 15223, 15239, 15312, 15313, 15355, 15380, 15391, 15394, 15406, 15408, 15445, 15561, 15740, 15770, 15894, 15932, 16086, 16183, 16534, 16723, 16743, 16759, 16763, 16767, 16777, 17035, 17234, 17386, 17531, 17543, 17547, 17651, 18044, 18396, 18457, 18492, 18509, 18553, 18565, 18569, 18628, 18639, 18645, 18682, 18968, 19004, 19017, 19234, 19257, 19498, 19609, 20014, 20341, 20870, 20907, 21342, 21447, 21916 |
| Cyclopropane-fatty-acyl-phospholipid synthase | 1255, 1578, 1660, 12568, 20238 |
| Cys/Met metabolism pyridoxal-phosphate-dependent enzymes | 986, 1968, 2896, 12525, 16598 |
| Cystathionine beta-lyase, eukaryotic | 2896 |
| Cysteine synthase A | 155 |
| Cysteine synthase K/M | 155 |
| Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site | 155, 4384, 12163, 19599 |
| Cysteinyl-tRNA synthetase, class Ia | 1508, 1541, 3497, 9230 |
| Cystinosin/ERS1p repeat | 2354, 2726, 3146, 11219, 12842 |
| Cytidine and deoxycytidylate deaminase, zinc-binding region | 19855 |
| Cytidine deaminase, homodimeric | 2260 |
| Cytidyltransferase-related | 1259, 1336, 3315, 14114 |
| Cytidylyltransferase | 1259, 1336, 3315, 3982, 5855, 12423, 14114 |
| Cytochrome b-245, heavy chain | 352, 3298, 8824, 10556 |
| Cytochrome b/b6, C-terminal | 4824, 7362 |
| Cytochrome b/b6, N-terminal | 4824, 6010 |
| Cytochrome b5 | 297, 606, 1281, 1544, 3059, 5438, 5919, 5966, 6675, 8090, 8237, 11114, 11202, 12013, 12551, 17576, 19571, 19953, 20174 |
| Cytochrome b561 | 700 |
| Cytochrome b561 / ferric reductase transmembrane | 553, 700, 2829, 4796, 7491, 16346 |
| Cytochrome b6 | 6010 |
| Cytochrome b6/f complex, subunit 5 | 18388 |
| Cytochrome bd ubiquinol oxidase, 14 kDa subunit | 1424 |
| Cytochrome c | 976 |
| Cytochrome c assembly protein | 7920, 13789 |
| Cytochrome C biogenesis protein | 6788 |
| Cytochrome c biogenesis protein, transmembrane region | 4569, 11263 |
| Cytochrome c oxidase assembly protein CtaG/Cox11 | 5862 |
| Cytochrome C oxidase copper chaperone | 8391 |
| Cytochrome C oxidase subunit II, transmembrane region | 3516, 16070 |
| Cytochrome c oxidase subunit Vc | 8068 |
| Cytochrome c oxidase, subunit I | 2719, 14857, 17974 |
| Cytochrome c oxidase, subunit II | 3516 |
| Cytochrome c oxidase, subunit III | 4915 |
| Cytochrome c oxidase, subunit Vb | 1367, 8610, 16677 |
| Cytochrome c oxidase, subunit VIa | 2924 |
| Cytochrome c region | 359, 387, 425, 976, 1151, 1804, 6311, 8030, 13522 |
| Cytochrome c, class I | 976, 6311 |
| Cytochrome c, class IA/ IB | 976 |
| Cytochrome c, monohaem | 976, 1151, 6311, 13522 |
| Cytochrome c-type biogenesis protein | 10531 |
| Cytochrome c-type biogenesis protein CcbS | 10531 |
| Cytochrome c-type biogenesis protein CcmB | 15763 |
| Cytochrome c-type biogenesis protein CcmC | 13789 |
| Cytochrome c1 | 1151, 17441, 19605 |
| Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 | 931, 1079, 1111, 1317, 1380, 1384, 1444, 2080, 2842, 3362, 3658, 4409, 7153, 8009, 8061, 8531, 8704, 8770, 9269, 9440, 9524, 9648, 11970, 12041, 12439, 13208, 13598, 14605, 15660, 16995, 18740, 19659, 20648 |
| Cytochrome f | 5795 |
| Cytochrome oxidase assembly | 8991 |
| Cytochrome oxidase c, subunit VIb | 1158, 9419, 20570, 20990 |
| Cytochrome P450 | 17, 44, 64, 238, 239, 332, 362, 519, 525, 579, 953, 1076, 1235, 1245, 1308, 1521, 1667, 2077, 2172, 2344, 2697, 3414, 3450, 3520, 3898, 4546, 6629, 6641, 7267, 7961, 7970, 7977, 7980, 7985, 9498, 11038, 11821, 12721, 12722, 12993, 13189, 13250, 13327, 13569, 14509, 14570, 14941, 15064, 15129, 15186, 15303, 15560, 15639, 15953, 15991, 16174, 16177, 16307, 16314, 16340, 16375, 16474, 16599, 16870, 17021, 17120, 17122, 17607, 17753, 18021, 18151, 18290, 18769, 18886, 19167, 19218, 20191, 20235, 21766, 21787, 21849, 21921, 21966 |
| Cytochrome-b5 reductase | 723 |
| Cytoplasmic fragile X mental retardation protein interacting protein | 8556 |
| Cytoplasmic peptidoglycan synthetases, C-terminal | 7210, 10796, 20349 |
| Cytosolic fatty-acid binding | 4913 |
| D-3-phosphoglycerate dehydrogenase | 600 |
| D-alanine--D-alanine ligase, N-terminal | 9557 |
| D-alanine--D-alanine ligase/VANA/B/C | 9557 |
| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region | 600, 689, 910, 1517, 4818, 14565, 17034, 17392 |
| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding | 600, 689, 910, 1517, 2418, 4818, 8423, 10894, 14565, 16437, 20574 |
| D-tyrosyl-tRNA(Tyr) deacylase | 4652 |
| D111/G-patch | 3329, 4366, 5357, 6792, 8173, 8731, 8808, 10158, 10166, 11334, 13138, 15810, 15920 |
| D123 | 6604 |
| DAHP synthetase I/KDSA | 2662, 17721 |
| DAHP synthetase, class II | 482, 11387, 14744, 21272 |
| Dak kinase | 2028, 9108 |
| Dak phosphatase | 2028, 11427 |
| DALR anticodon binding | 1843, 10145 |
| DBP10CT | 112, 4877, 16994 |
| DC1 | 777, 7721, 11031, 17232, 18007, 18600, 20242, 21476 |
| Dcp1-like decapping | 2103 |
| Dcp2, box A | 8437 |
| dDENN | 2960, 3085, 14105, 15963 |
| DDHD | 8703 |
| DDT | 7727, 8765, 10165 |
| DEAD/DEAH box helicase | 112, 139, 181, 649, 758, 872, 892, 895, 1147, 1376, 1446, 1501, 1868, 1990, 3201, 3385, 5424, 5473, 5580, 5697, 5801, 6342, 6920, 8666, 8872, 8881, 9064, 9339, 9448, 11184, 11472, 12501, 12829, 13064, 13093, 13604, 13889, 13975, 14017, 14701, 15091, 15272, 15542, 15862, 17028, 17586, 18983 |
| DEAD/DEAH box helicase, N-terminal | 112, 139, 181, 187, 649, 758, 872, 892, 895, 1147, 1376, 1446, 1501, 1868, 1889, 1990, 3201, 3385, 4211, 5424, 5473, 5580, 5697, 5738, 5801, 6342, 6920, 7512, 7790, 8872, 8881, 9047, 9339, 9448, 10156, 10228, 10661, 12626, 13889, 13962, 13975, 14017, 14701, 15032, 15272, 15811, 15986, 16364, 17028, 18983, 19013, 21012, 21091 |
| DEAD_2 | 5419, 10156 |
| DEATH-like | 5041 |
| Dedicator of cytokinesis | 3490, 10843, 10865 |
| Defender against death DAD protein | 1755 |
| Dehydrin | 230, 1980, 3850, 7683, 8676, 9321, 11916, 12648, 16858, 16884, 16904, 18361, 18734, 18889, 19833, 20371, 20451, 20536, 21934, 21999, 22055, 22104 |
| Dehydrogenase, E1 component | 948, 1208, 1423, 1585, 9869, 12747, 13161 |
| Dehydroquinase class I | 2187, 3856 |
| Delayed-early response protein/equilibrative nucleoside transporter | 2402, 2986, 9787, 19524 |
| Delta 1-pyrroline-5-carboxylate reductase | 3064 |
| Delta crystallin | 1714, 2946 |
| Delta endotoxin central region | 4966 |
| Delta-aminolevulinic acid dehydratase | 1595 |
| DENN | 2960, 3085, 12523 |
| Density-regulated protein DRP1 | 3271 |
| Deoxyhypusine synthase | 2972, 10597 |
| Deoxynucleoside kinase | 4192, 10617 |
| Deoxyribodipyrimidine photolyase, class 1 | 837, 6256 |
| Deoxyribonuclease/rho motif-related TRAM | 253, 4567, 5068, 8804, 10921 |
| DeoxyUTP pyrophosphatase | 1751, 16947 |
| DeoxyUTP pyrophosphatase subfamily 1 | 1751 |
| Dephospho-CoA kinase | 3315, 4448, 19654 |
| Der1-like | 2292, 9543 |
| DEXDc2 | 5419, 10156 |
| Di-copper centre-containing | 156, 863, 2602, 5282, 8051, 14308, 18639 |
| Di-trans-poly-cis-decaprenylcistransferase | 2223, 4341 |
| Diacylglycerol acyltransferase | 1802, 20532 |
| Diacylglycerol kinase accessory region | 1505, 1681, 2409, 12295 |
| Diacylglycerol kinase, catalytic region | 1505, 1681, 1892, 2409, 4562, 8912, 13157, 16064, 19706 |
| Diaminopimelate decarboxylase | 2274 |
| Diaminopimelate epimerase | 2740, 15960 |
| DIE2/ALG10 | 6074, 20043 |
| Dienelactone hydrolase | 670, 2675, 5413, 13385, 14720 |
| Dihydrodipicolinate reductase | 3459, 4497, 9527 |
| Dihydrodipicolinate synthetase | 1688, 6035, 18939 |
| Dihydrofolate reductase region | 1835 |
| Dihydrolipoamide dehydrogenase | 1140, 1808, 19702 |
| Dihydrolipoamide succinyltransferase | 1092 |
| Dihydroneopterin aldolase | 3105 |
| Dihydroneopterin aldolase family | 3105 |
| Dihydroorotase | 4410 |
| Dihydroorotate dehydrogenase | 2559, 4875 |
| Dihydroorotate dehydrogenase 1 | 2559 |
| Dihydroorotate dehydrogenase 2 | 4875 |
| Dihydroorotate oxidase | 2559 |
| Dihydropteroate synthase | 6125 |
| Dihydropteroate synthase, DHPS | 6125 |
| Dihydropteroate synthase-like | 3058, 6125 |
| Dihydrouridine synthase, DuS | 2597, 3761, 4590, 8815, 10226, 11111, 14405, 18374 |
| Dihydroxy-acid and 6-phosphogluconate dehydratase | 1872, 9400, 10672 |
| Dilute | 20149 |
| Dimeric alpha-beta barrel | 2472, 2852, 5310, 5991, 6219, 12361, 12363 |
| Dimerisation | 105, 133, 10571, 14062, 19563 |
| Dimethylmenaquinone methyltransferase | 1569 |
| Dip2/Utp12 | 8869 |
| Diphosphomevalonate decarboxylase | 2033, 13945 |
| Diphthamide synthesis DPH2 protein | 5211, 8879, 12675, 18325 |
| DIRP | 4463 |
| Disease resistance protein | 20, 65, 80, 93, 239, 676, 1355, 3960, 7910, 8138, 10390, 12841, 14262, 16838, 17380, 18837, 20113, 20328, 21301 |
| Disulphide isomerase | 344, 1103, 2158 |
| Disulphide-bond formation facilitator, insertion | 93, 2800 |
| DJ-1 | 1205 |
| DKCLD | 2436 |
| DNA 3-phosphatase | 8858 |
| DNA binding protein S1FA | 3588, 4834 |
| DNA breaking-rejoining enzyme, catalytic core | 1946 |
| DNA glycosylase | 844, 983, 3573, 6173, 6269, 10164, 11022, 12043, 13454, 15506, 17611 |
| DNA gyrase B | 9330 |
| DNA gyrase C-terminal repeat, beta-propeller | 5023, 11663 |
| DNA gyrase, subunit B, C-terminal | 3096 |
| DNA gyrase/topoisomerase IV, subunit A | 9330, 10960, 11663 |
| DNA gyrase/topoisomerase IV, subunit B | 3096 |
| DNA ligase, N-terminal | 2272 |
| DNA mismatch repair protein | 3341, 6988, 8992, 9953, 11574 |
| DNA mismatch repair protein MutS, C-terminal | 4588, 6925, 7287, 7665, 10998, 11239, 14185, 18721 |
| DNA mismatch repair protein MutS, N-terminal | 6925, 7665 |
| DNA photolyase, class 2 | 3269, 19973 |
| DNA photolyase, FAD- binding N-terminal | 837, 6256 |
| DNA photolyase, FAD-binding | 837, 3269, 6256, 8070, 11197, 19973 |
| DNA photolyase, N-terminal | 837, 3269, 6256, 6926, 8070, 11197, 12505, 15574 |
| DNA polymerase (pol2) | 4846 |
| DNA polymerase A | 2286, 14701 |
| DNA polymerase B region | 3492, 4405, 4846, 6674, 9769 |
| DNA polymerase B, exonuclease | 4405, 4846 |
| DNA polymerase beta, N-terminal-like | 5878, 7277, 16210 |
| DNA polymerase delta, subunit 4 | 8365 |
| DNA polymerase epsilon subunit B | 4233, 5773, 9271 |
| DNA polymerase III clamp loader subunit, C-terminal | 1528, 3659, 3869, 3883, 5770, 11719, 11752, 11759, 14065, 15934 |
| DNA polymerase III, subunits gamma and tau | 3869 |
| DNA polymerase type B, organellar and viral | 14793 |
| DNA polymerase V | 8805 |
| DNA polymerase X | 7277 |
| DNA polymerase, beta-like region | 940, 3278, 4025, 4957, 5818, 7503, 14461, 15943 |
| DNA primase, small subunit | 4268, 15320, 18432 |
| DNA recombination repair protein, BRCA2 | 7731 |
| DNA repair exonuclease | 6181 |
| DNA repair helicase Rad3 | 10156 |
| DNA repair metallo-beta-lactamase | 5671, 7757, 17135, 19739 |
| DNA repair protein (XPGC)/yeast Rad | 3035, 6775, 11702, 13108, 17295 |
| DNA repair protein rad10 | 9534 |
| DNA repair protein Rad4 | 7154 |
| DNA repair protein RadA | 9972 |
| DNA repair protein, Rev1 | 14664 |
| DNA topoisomerase I | 3523, 4289, 17045, 18971 |
| DNA topoisomerase I, ATP-binding | 3523, 4289 |
| DNA topoisomerase I, DNA-binding | 3523, 4289, 18971 |
| DNA topoisomerase II | 8, 2281, 3096, 9330, 20078 |
| DNA topoisomerase VI subunit A (TOP6A) | 3736 |
| DNA topoisomerase, type II | 3736, 7798, 11541, 18802 |
| DNA topoisomerase, type IIB | 3736, 7798, 11541 |
| DNA-binding HORMA | 6742, 8555, 13135 |
| DNA-binding SAP | 4011, 8266, 8503, 11296, 16223 |
| DNA-binding TFAR19-related protein | 3468 |
| DNA-binding WRKY | 20, 80, 101, | |