Search results for family: 10196, total 18 Unipeptides retrieved.


Related families 2 families found.
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
brap6080  interProS_CA991581Brassica rapa (field mustard) 
brap7512 S_CA991581.11kBrassica rapa (field mustard) 
csin7751 Csi.3869Citrus sinensis (orange) 
ghyb5389 329156Gerbera hybrid.cultivar () 
gmax79406 Gma.19182Glycine max (soybean) 
hpar1303 S_CF080925Helianthus paradoxus () 
lcor10313 Lco.3040Lotus corniculatus (lotus) 
lesc64052 Les.11136Lycopersicon esculentum (tomato) 
palb11294 S_CX656230.7kPopulus alba (white poplar) 
palb956 S_CX656230Populus alba (white poplar) 
pbal1609 Pba.1880Populus balsamifera (balsam poplar) 
ptrc9002 PUT-148a-Populus_trichocarpa-19036Populus trichocarpa (western balsam poplar) 
taes134543 Ta.7126Triticum aestivum (bread wheat) 
vvin34790 Vvi.11283Vitis vinifera (wine grape) 
zmay74663 Zm.4455Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
ghir48233 CO103939Gossypium hirsutum (cotton (tetraploid)) 
ppat28505 Ppa.6663Physcomitrella patens () 
trur1894 S_CN204843Tortula ruralis () 
Species
Brassica rapa  Citrus sinensis  Gerbera hybrid.cultivar  Glycine max  Gossypium hirsutum  Helianthus paradoxus  Lotus corniculatus  Lycopersicon esculentum  Physcomitrella patens  Populus alba  Populus balsamifera  Populus trichocarpa  Tortula ruralis  Triticum aestivum  Vitis vinifera  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Brassica rapa (field mustard)  ( Select Species     Clear Species)
  brap6080 S_CA9915811
  brap7512 S_CA991581.11k1
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin7751 Csi.38691
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb5389 3291561
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax79406 Gma.191821
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir48233 CO1039392
Helianthus paradoxus ()  ( Select Species     Clear Species)
  hpar1303 S_CF0809251
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor10313 Lco.30401
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc64052 Les.111361
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat28505 Ppa.66632
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb11294 S_CX656230.7k1
  palb956 S_CX6562301
Populus balsamifera (balsam poplar)  ( Select Species     Clear Species)
  pbal1609 Pba.18801
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc9002 PUT-148a-Populus_trichocarpa-190361
Tortula ruralis ()  ( Select Species     Clear Species)
  trur1894 S_CN2048432
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes134543 Ta.71261
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin34790 Vvi.112831
Zea mays (corn)  ( Select Species     Clear Species)
  zmay74663 Zm.44551
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: brap6080 LENGTH: 164 aa
IPR006058
2Fe-2S ferredoxin, iron-sulfur binding site
PS00197 [52-60]? NA PS00197 2FE2S_FER_1 2FE2S_FER_1
no IPR
DOMAIN [1-1]T DOMAIN DOMAIN N-REGION.[2-9]T DOMAIN DOMAIN H-REGION.[10-14]T DOMAIN DOMAIN C-REGION.[112-164]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
SIGNAL [1-14]T SIGNAL SIGNAL SIGNAL
TRANSMEM [85-111]T TRANSMEM TRANSMEM TRANSMEM

Subfamily ID: 2

No Results.
Subfamily
1  2  

Sub family ID: 1
IPR006058: 2Fe-2S ferredoxin, iron-sulfur binding site
Biological ProcessGO:0006118, electron transport
Molecular FunctionGO:0005489, electron transporter activity
 
Department of Biology | University of North Carolina at Chapel Hill
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