Search results for family: 10408, total 17 Unipeptides retrieved.


Related families 3 families found.
Excluded Unipeptides View
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
csie235 C_CV013952Camellia sinensis (black tea) 
gsoj6613 PUT-148a-Glycine_soja-510078Glycine soja (wild soybean) 
harg1165 S_CF093640Helianthus argophyllus () 
mgut1052 MgU2604Mimulus guttatus (spotted monkey flower) 
mgut380 MgU10525Mimulus guttatus (spotted monkey flower) 
mgut381 MgU10526Mimulus guttatus (spotted monkey flower) 
mgut4677 MgU9663Mimulus guttatus (spotted monkey flower) 
nsyl3113 S_BP752186Nicotiana sylvestris (wood tobacco) 
nrus9442 CV017059Nicotiana tabacum (common tobacco) 
ptri1637 C_CV708658Poncirus trifoliata () 
ptri3329 C_CX638713Poncirus trifoliata () 
soff2077 Sof.2824Saccharum officinarum (sugar cane) 
soff2675  interProSof.3572Saccharum officinarum (sugar cane) 
smil1258 S_CV171148Salvia miltiorrhiza (redroot sage) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
mesc3006 S_CK651802Manihot esculenta (cassava) 
nben7809 CN745628Nicotiana benthamiana (wild tobacco) 
nrus4448  interProBP128451Nicotiana tabacum (common tobacco) 
Species
Camellia sinensis  Glycine soja  Helianthus argophyllus  Manihot esculenta  Mimulus guttatus  Nicotiana benthamiana  Nicotiana sylvestris  Nicotiana tabacum  Poncirus trifoliata  Saccharum officinarum  Salvia miltiorrhiza  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Camellia sinensis (black tea)  ( Select Species     Clear Species)
  csie235 C_CV0139521
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj6613 PUT-148a-Glycine_soja-5100781
Helianthus argophyllus ()  ( Select Species     Clear Species)
  harg1165 S_CF0936401
Manihot esculenta (cassava)  ( Select Species     Clear Species)
  mesc3006 S_CK6518022
Mimulus guttatus (spotted monkey flower)  ( Select Species     Clear Species)
  mgut1052 MgU26041
  mgut380 MgU105251
  mgut381 MgU105261
  mgut4677 MgU96631
Nicotiana benthamiana (wild tobacco)  ( Select Species     Clear Species)
  nben7809 CN7456282
Nicotiana sylvestris (wood tobacco)  ( Select Species     Clear Species)
  nsyl3113 S_BP7521861
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus4448 BP1284512
  nrus9442 CV0170591
Poncirus trifoliata ()  ( Select Species     Clear Species)
  ptri1637 C_CV7086581
  ptri3329 C_CX6387131
Saccharum officinarum (sugar cane)  ( Select Species     Clear Species)
  soff2077 Sof.28241
  soff2675 Sof.35721
Salvia miltiorrhiza (redroot sage)  ( Select Species     Clear Species)
  smil1258 S_CV1711481
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: soff2675 LENGTH: 150 aa
IPR000245
Vacuolar H+-transporting two-sector ATPase, C subunit
PR00122 [30-54]T 2.9e-53 PR00122 VACATPASE[56-80]T 2.9e-53 PR00122 VACATPASE[107-133]T 2.9e-53 PR00122 VACATPASE[134-157]T 2.9e-53 PR00122 VACATPASE VACATPASE
IPR002379
H+-transporting two-sector ATPase, C subunit
PF00137 [14-79]T 2.3e-14 PF00137 ATP-synt_C[93-150]T 2.6e-16 PF00137 ATP-synt_C ATP-synt_C
IPR011555
Vacuolar H+-transporting two-sector ATPase, C subunit eukaryotic
TIGR01100 [13-121]T 1.4e-71 TIGR01100 V_ATP_synt_C: V-type ATPase, C subunit V_ATP_synt_C: V-type ATPase, C subunit
no IPR
DOMAIN [36-55]T DOMAIN DOMAIN CYTOPLASMIC.[119-129]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
PTHR10263 [1-150]T 1.9e-83 PTHR10263 VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT
PTHR10263:SF2 [1-150]T 1.9e-83 PTHR10263:SF2 VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT 1, 2, 3, 4 VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT 1, 2, 3, 4
SSF81333 [7-79]T 1.3e-14 SSF81333 F1F0 ATP synthase subunit C[86-150]T 6.8e-13 SSF81333 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
TRANSMEM [12-35]T TRANSMEM TRANSMEM [56-76]T TRANSMEM TRANSMEM [96-118]T TRANSMEM TRANSMEM [130-149]T TRANSMEM TRANSMEM TRANSMEM

Subfamily ID: 2

SEQUENCE: nrus4448 LENGTH: 47 aa
no IPR
DOMAIN [42-47]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
PTHR10263 [1-47]T 1.9e-12 PTHR10263 VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT
PTHR10263:SF2 [1-47]T 1.9e-12 PTHR10263:SF2 VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT 1, 2, 3, 4 VACUOLAR ATP SYNTHASE PROTEOLIPID SUBUNIT 1, 2, 3, 4
TRANSMEM [18-41]T TRANSMEM TRANSMEM TRANSMEM
Subfamily
1  2  

Sub family ID: 1
IPR000245: Vacuolar H+-transporting two-sector ATPase, C subunit
Biological ProcessGO:0015986, ATP synthesis coupled proton transport
Cellular ComponentGO:0016020, membrane
GO:0016021, integral to membrane
GO:0016469, proton-transporting two-sector ATPase complex
Molecular FunctionGO:0046933, hydrogen-transporting ATP synthase activity, rotational mechanism
GO:0046961, hydrogen-transporting ATPase activity, rotational mechanism
IPR002379: H+-transporting two-sector ATPase, C subunit
Biological ProcessGO:0015986, ATP synthesis coupled proton transport
Cellular ComponentGO:0016020, membrane
GO:0016469, proton-transporting two-sector ATPase complex
Molecular FunctionGO:0046933, hydrogen-transporting ATP synthase activity, rotational mechanism
GO:0046961, hydrogen-transporting ATPase activity, rotational mechanism
IPR011555: Vacuolar H+-transporting two-sector ATPase, C subunit eukaryotic
Biological ProcessGO:0015986, ATP synthesis coupled proton transport
Cellular ComponentGO:0016021, integral to membrane
GO:0016469, proton-transporting two-sector ATPase complex
 
Department of Biology | University of North Carolina at Chapel Hill
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