Search results for family: 10774, total 15 Unipeptides retrieved.


Related families 7 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

View results sorted by

Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
ghyb2133 324761Gerbera hybrid.cultivar () 
ghir52887  interProTC36389Gossypium hirsutum (cotton (tetraploid)) 
jreg2020 S_CV197620Juglans regia (English walnut) 
lesc66976 Les.12680Lycopersicon esculentum (tomato) 
nrus11089 BP131551Nicotiana tabacum (common tobacco) 
pame3807 210348Persea americana (avocado) 
palb3677 S_CF233562Populus alba (white poplar) 
palb8994 S_CF233562.11kPopulus alba (white poplar) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
atha102625 At5g23770Arabidopsis thaliana (thale cress) 
atha103536  interProAt2g47220Arabidopsis thaliana (thale cress) 
atha104976 At5g23800Arabidopsis thaliana (thale cress) 
atha107120 At1g11420Arabidopsis thaliana (thale cress) 
atha84711 At1g03300Arabidopsis thaliana (thale cress) 
atha89832 At3g62300Arabidopsis thaliana (thale cress) 
atha99015 At5g23780Arabidopsis thaliana (thale cress) 
Species
Arabidopsis thaliana  Gerbera hybrid.cultivar  Gossypium hirsutum  Juglans regia  Lycopersicon esculentum  Nicotiana tabacum  Persea americana  Populus alba  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha102625 At5g237702
  atha103536 At2g472202
  atha104976 At5g238002
  atha107120 At1g114202
  atha84711 At1g033002
  atha89832 At3g623002
  atha99015 At5g237802
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb2133 3247611
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir52887 TC363891
Juglans regia (English walnut)  ( Select Species     Clear Species)
  jreg2020 S_CV1976201
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc66976 Les.126801
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus11089 BP1315511
Persea americana (avocado)  ( Select Species     Clear Species)
  pame3807 2103481
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb3677 S_CF2335621
  palb8994 S_CF233562.11k1
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: ghir52887 LENGTH: 252 aa
IPR007930
Protein of unknown function DUF724
PF05266 [52-251]T 3.8e-57 PF05266 DUF724 DUF724

Subfamily ID: 2

SEQUENCE: atha103536 LENGTH: 469 aa
IPR000194
H+-transporting two-sector ATPase, alpha/beta subunit, central region
PS00152 [183-192]? NA PS00152 ATPASE_ALPHA_BETA ATPASE_ALPHA_BETA
IPR001247
Exoribonuclease
PF01138 [27-390]T 0.00047 PF01138 RNase_PH RNase_PH
IPR002347
Glucose/ribitol dehydrogenase
PTHR19410 [118-161]T 1.2e-13 PTHR19410 SHORT-CHAIN DEHYDROGENASES/REDUCTASE SHORT-CHAIN DEHYDROGENASES/REDUCTASE
IPR007930
Protein of unknown function DUF724
PF05266 [275-469]T 4.7e-98 PF05266 DUF724 DUF724
no IPR
PTHR19410:SF66 [118-161]T 1.2e-13 PTHR19410:SF66 TROPINONE REDUCTASE TROPINONE REDUCTASE
SSF54211 [12-148]T 4.7e-15 SSF54211 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
Subfamily
1  2  

Sub family ID: 2
IPR000194: H+-transporting two-sector ATPase, alpha/beta subunit, central region
Biological ProcessGO:0015986, ATP synthesis coupled proton transport
Cellular ComponentGO:0016469, proton-transporting two-sector ATPase complex
Molecular FunctionGO:0005524, ATP binding
GO:0046933, hydrogen-transporting ATP synthase activity, rotational mechanism
GO:0046961, hydrogen-transporting ATPase activity, rotational mechanism
IPR001247: 3' exoribonuclease
Biological ProcessGO:0006396, RNA processing
Molecular FunctionGO:0000175, 3'-5'-exoribonuclease activity
GO:0003723, RNA binding
IPR002347: Glucose/ribitol dehydrogenase
Biological ProcessGO:0008152, metabolism
Molecular FunctionGO:0016491, oxidoreductase activity
 
Department of Biology | University of North Carolina at Chapel Hill
Comments / Questions