Search results for family: 12714, total 10 Unipeptides retrieved.


Related families 1 families found.
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

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Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
ccle2574 PUT-148a-Citrus_clementina-3795Citrus clementina () 
gmax79932 Gma.17268Glycine max (soybean) 
ggne212 S_CB082504Gnetum gnemon () 
lcor11610 Lco.4777Lotus corniculatus (lotus) 
lcor12593  interProLco.5993Lotus corniculatus (lotus) 
msat1709 S_CO517300Medicago sativa (alfalfa) 
pnig2237 C_BP935143Populus nigra (black poplar) 
smil1204 S_CV163881Salvia miltiorrhiza (redroot sage) 
smil925 S_CV170770Salvia miltiorrhiza (redroot sage) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
ghyb4233  interPro327614Gerbera hybrid.cultivar () 
Species
Citrus clementina  Gerbera hybrid.cultivar  Glycine max  Gnetum gnemon  Lotus corniculatus  Medicago sativa  Populus nigra  Salvia miltiorrhiza  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Citrus clementina ()  ( Select Species     Clear Species)
  ccle2574 PUT-148a-Citrus_clementina-37951
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb4233 3276142
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax79932 Gma.172681
Gnetum gnemon ()  ( Select Species     Clear Species)
  ggne212 S_CB0825041
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor11610 Lco.47771
  lcor12593 Lco.59931
Medicago sativa (alfalfa)  ( Select Species     Clear Species)
  msat1709 S_CO5173001
Populus nigra (black poplar)  ( Select Species     Clear Species)
  pnig2237 C_BP9351431
Salvia miltiorrhiza (redroot sage)  ( Select Species     Clear Species)
  smil1204 S_CV1638811
  smil925 S_CV1707701
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: lcor12593 LENGTH: 88 aa
IPR008985
Concanavalin A-like lectin/glucanase
SSF49899 [5-84]T 2.9e-14 SSF49899 Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases
IPR010713
Xyloglucan endo-transglycosylase, C-terminal
PF06955 [33-84]T 1e-24 PF06955 XET_C XET_C

Subfamily ID: 2

SEQUENCE: ghyb4233 LENGTH: 80 aa
IPR008985
Concanavalin A-like lectin/glucanase
SSF49899 [33-78]T 0.00024 SSF49899 Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases
IPR010713
Xyloglucan endo-transglycosylase, C-terminal
PF06955 [21-76]T 5.5e-06 PF06955 XET_C XET_C
Subfamily
1  2  

Sub family ID: 1
IPR010713: Xyloglucan endo-transglycosylase, C-terminal
Biological ProcessGO:0006073, glucan metabolism
Cellular ComponentGO:0005618, cell wall
GO:0048046, apoplast
Molecular FunctionGO:0016762, xyloglucan:xyloglucosyl transferase activity
 
Sub family ID: 2
IPR010713: Xyloglucan endo-transglycosylase, C-terminal
Biological ProcessGO:0006073, glucan metabolism
Cellular ComponentGO:0005618, cell wall
GO:0048046, apoplast
Molecular FunctionGO:0016762, xyloglucan:xyloglucosyl transferase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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