Search results for family: 1394, total 55 Unipeptides retrieved.


Related families 13 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  3  4  5  6  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
acep12383  interProTC499Allium cepa (onion) 
acep20238 CF446881Allium cepa (onion) 
atri9091 199948Amborella trichopoda (amborella) 
amaj7801 C_AJ806508Antirrhinum majus (snapdragon) 
agra365 S_CN254763Apium graveolens (celery) 
atha90946 At5g20890Arabidopsis thaliana (thale cress) 
aoff2649 229788Asparagus officinalis (garden asparagus) 
cann17337 TC5566Capsicum annuum (pepper) 
crei760 Cre.1424Chlamydomonas reinhardtii () 
csin11793 Csi.8380Citrus sinensis (orange) 
ecal8944 38484Eschscholzia californica (california poppy) 
ghyb4784 328358Gerbera hybrid.cultivar () 
gsoj8360 PUT-148a-Glycine_soja-18510082Glycine soja (wild soybean) 
garb10682 S_BQ405029Gossypium arboreum (tree cotton) 
garb12205 C_BG441945Gossypium arboreum (tree cotton) 
ghir52210 TC28131Gossypium hirsutum (cotton (tetraploid)) 
ghir57139 BG441945Gossypium hirsutum (cotton (tetraploid)) 
ghir72951 BQ405029Gossypium hirsutum (cotton (tetraploid)) 
hcen169 C_CB086215Hedyotis centranthoides () 
hter5603 HedyotisTUC04-08-17.908Hedyotis terminalis () 
hvul56334 Hv.6194Hordeum vulgare (barley) 
inil6759 C_BJ573066Ipomoea nil (qian niu) 
lsat46920 Lsa.2941Lactuca sativa (lettuce) 
lsat48765 Lsa.4847Lactuca sativa (lettuce) 
lesc66138 Les.4670Lycopersicon esculentum (tomato) 
mtru86543 TC107588Medicago truncatula (barrel medic) 
mtru96629 TC107589Medicago truncatula (barrel medic) 
nrus5061 BP535519Nicotiana tabacum (common tobacco) 
osat146530 3335.m00143 Protein sequence may be in errorOryza sativa (rice) 
osat190752 9227.m00131 Protein sequence may be in errorOryza sativa (rice) 
osat211303 Os03g42220Oryza sativa (rice) 
osat215073 3586.m00163 Protein sequence may be in errorOryza sativa (rice) 
pame2699 213238Persea americana (avocado) 
pvul5349 PUT-148a-Phaseolus_vulgaris-6895Phaseolus vulgaris (common bean) 
pgla2265 TC4461Picea glauca (white spruce) 
ptae53471 TC75338Pinus taeda (loblolly pine) 
pbal152 Pba.175Populus balsamifera (balsam poplar) 
pdel4806 C_CK319052Populus deltoides () 
pdel710 S_CX176055Populus deltoides () 
peup3750 C_AJ771861Populus euphratica () 
pnig2782 C_BP930541Populus nigra (black poplar) 
ptrc3403 PUT-148a-Populus_trichocarpa-12997Populus trichocarpa (western balsam poplar) 
pers4808 S_AJ870630Prunus persica (peach) 
shen1183 308156Saruma henryi () 
stub45695 Stu.4978Solanum tuberosum (potato) 
sorg40287 Sbi.1371Sorghum bicolor (sorghum) 
taes149062 Ta.394Triticum aestivum (bread wheat) 
vshu29 C_CV093583Vitis shuttleworthii (calloose grape) 
vvin24982 Vvi.2222Vitis vinifera (wine grape) 
yfil629 274735Yucca filamentosa (spoon-leaf yucca) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
aame5  interPro279525Acorus americanus (sweetflag) 
Subfamily ID: 3( Select Subfamily     Clear Subfamily)
zmay73189  interProZm.6590Zea mays (corn) 
Subfamily ID: 4( Select Subfamily     Clear Subfamily)
hvul60823  interProHv.8893Hordeum vulgare (barley) 
Subfamily ID: 5( Select Subfamily     Clear Subfamily)
tmon1135  interProPUT-148a-Triticum_monococcum-1641Triticum monococcum (einkorn wheat) 
Subfamily ID: 6( Select Subfamily     Clear Subfamily)
zele17336  interProPUT-148a-Zinnia_elegans-415756Zinnia elegans (zinnia) 
Species
Acorus americanus  Allium cepa  Amborella trichopoda  Antirrhinum majus  Apium graveolens  Arabidopsis thaliana  Asparagus officinalis  Capsicum annuum  Chlamydomonas reinhardtii  Citrus sinensis  Eschscholzia californica  Gerbera hybrid.cultivar  Glycine soja  Gossypium arboreum  Gossypium hirsutum  Hedyotis centranthoides  Hedyotis terminalis  Hordeum vulgare  Ipomoea nil  Lactuca sativa  Lycopersicon esculentum  Medicago truncatula  Nicotiana tabacum  Oryza sativa  Persea americana  Phaseolus vulgaris  Picea glauca  Pinus taeda  Populus balsamifera  Populus deltoides  Populus euphratica  Populus nigra  Populus trichocarpa  Prunus persica  Saruma henryi  Solanum tuberosum  Sorghum bicolor  Triticum aestivum  Triticum monococcum  Vitis shuttleworthii  Vitis vinifera  Yucca filamentosa  Zea mays  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame5 2795252
Allium cepa (onion)  ( Select Species     Clear Species)
  acep12383 TC4991
  acep20238 CF4468811
Amborella trichopoda (amborella)  ( Select Species     Clear Species)
  atri9091 1999481
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj7801 C_AJ8065081
Apium graveolens (celery)  ( Select Species     Clear Species)
  agra365 S_CN2547631
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha90946 At5g208901
Asparagus officinalis (garden asparagus)  ( Select Species     Clear Species)
  aoff2649 2297881
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann17337 TC55661
Chlamydomonas reinhardtii ()  ( Select Species     Clear Species)
  crei760 Cre.14241
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin11793 Csi.83801
Eschscholzia californica (california poppy)  ( Select Species     Clear Species)
  ecal8944 384841
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb4784 3283581
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj8360 PUT-148a-Glycine_soja-185100821
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb10682 S_BQ4050291
  garb12205 C_BG4419451
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir52210 TC281311
  ghir57139 BG4419451
  ghir72951 BQ4050291
Hedyotis centranthoides ()  ( Select Species     Clear Species)
  hcen169 C_CB0862151
Hedyotis terminalis ()  ( Select Species     Clear Species)
  hter5603 HedyotisTUC04-08-17.9081
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul56334 Hv.61941
  hvul60823 Hv.88934
Ipomoea nil (qian niu)  ( Select Species     Clear Species)
  inil6759 C_BJ5730661
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat46920 Lsa.29411
  lsat48765 Lsa.48471
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc66138 Les.46701
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru86543 TC1075881
  mtru96629 TC1075891
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus5061 BP5355191
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat146530 3335.m00143 Protein sequence may be in error1
  osat190752 9227.m00131 Protein sequence may be in error1
  osat211303 Os03g422201
  osat215073 3586.m00163 Protein sequence may be in error1
Persea americana (avocado)  ( Select Species     Clear Species)
  pame2699 2132381
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul5349 PUT-148a-Phaseolus_vulgaris-68951
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla2265 TC44611
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae53471 TC753381
Populus balsamifera (balsam poplar)  ( Select Species     Clear Species)
  pbal152 Pba.1751
Populus deltoides ()  ( Select Species     Clear Species)
  pdel4806 C_CK3190521
  pdel710 S_CX1760551
Populus euphratica ()  ( Select Species     Clear Species)
  peup3750 C_AJ7718611
Populus nigra (black poplar)  ( Select Species     Clear Species)
  pnig2782 C_BP9305411
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc3403 PUT-148a-Populus_trichocarpa-129971
Prunus persica (peach)  ( Select Species     Clear Species)
  pers4808 S_AJ8706301
Saruma henryi ()  ( Select Species     Clear Species)
  shen1183 3081561
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub45695 Stu.49781
Sorghum bicolor (sorghum)  ( Select Species     Clear Species)
  sorg40287 Sbi.13711
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes149062 Ta.3941
Triticum monococcum (einkorn wheat)  ( Select Species     Clear Species)
  tmon1135 PUT-148a-Triticum_monococcum-16415
Vitis shuttleworthii (calloose grape)  ( Select Species     Clear Species)
  vshu29 C_CV0935831
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin24982 Vvi.22221
Yucca filamentosa (spoon-leaf yucca)  ( Select Species     Clear Species)
  yfil629 2747351
Zea mays (corn)  ( Select Species     Clear Species)
  zmay73189 Zm.65903
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele17336 PUT-148a-Zinnia_elegans-4157566
Subfamily
1  2  3  4  5  6  

Subfamily ID: 1

SEQUENCE: acep12383 LENGTH: 464 aa
IPR001844
Chaperonin Cpn60
PR00298 [32-58]T 7.6e-12 PR00298 CHAPERONIN60[86-113]T 7.6e-12 PR00298 CHAPERONIN60[385-406]T 7.6e-12 PR00298 CHAPERONIN60 CHAPERONIN60
IPR002194
Chaperonin TCP-1
PS00750 [33-45]T 8e-5 PS00750 TCP1_1 TCP1_1
PS00751 [56-72]T 8e-5 PS00751 TCP1_2 TCP1_2
PS00995 [84-92]T 8e-5 PS00995 TCP1_3 TCP1_3
IPR002423
Chaperonin Cpn60/TCP-1
PF00118 [28-464]T 1.9e-120 PF00118 Cpn60_TCP1 Cpn60_TCP1
PR00304 [30-46]T 1.1e-30 PR00304 TCOMPLEXTCP1[54-72]T 1.1e-30 PR00304 TCOMPLEXTCP1[84-103]T 1.1e-30 PR00304 TCOMPLEXTCP1[365-387]T 1.1e-30 PR00304 TCOMPLEXTCP1[398-410]T 1.1e-30 PR00304 TCOMPLEXTCP1 TCOMPLEXTCP1
PTHR11353 [1-464]T 0 PTHR11353 CHAPERONIN CHAPERONIN
IPR008950
GroEL-like chaperone, ATPase
SSF48592 [11-464]T 2.8e-58 SSF48592 GroEL equatorial domain-like GroEL equatorial domain-like
IPR012716
T-complex protein 1, beta subunit
TIGR02341 [3-464]T 2.4e-262 TIGR02341 chap_CCT_beta: T-complex protein 1, bet chap_CCT_beta: T-complex protein 1, bet
no IPR
PTHR11353:SF23 [1-464]T 0 PTHR11353:SF23 CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB

Subfamily ID: 2

SEQUENCE: aame5 LENGTH: 99 aa
IPR002423
Chaperonin Cpn60/TCP-1
PF00118 [1-92]T 5e-27 PF00118 Cpn60_TCP1 Cpn60_TCP1
PTHR11353 [2-99]T 3.9e-50 PTHR11353 CHAPERONIN CHAPERONIN
IPR008950
GroEL-like chaperone, ATPase
SSF48592 [1-88]T 8.2e-22 SSF48592 GroEL equatorial domain-like GroEL equatorial domain-like
no IPR
PTHR11353:SF23 [2-99]T 3.9e-50 PTHR11353:SF23 CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB

Subfamily ID: 3

SEQUENCE: zmay73189 LENGTH: 179 aa
IPR002423
Chaperonin Cpn60/TCP-1
PF00118 [31-172]T 4.6e-36 PF00118 Cpn60_TCP1 Cpn60_TCP1
PTHR11353 [1-179]T 3.3e-81 PTHR11353 CHAPERONIN CHAPERONIN
IPR008950
GroEL-like chaperone, ATPase
SSF48592 [57-168]T 1.5e-27 SSF48592 GroEL equatorial domain-like GroEL equatorial domain-like
no IPR
PTHR11353:SF23 [1-179]T 3.3e-81 PTHR11353:SF23 CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB

Subfamily ID: 4

SEQUENCE: hvul60823 LENGTH: 81 aa
IPR002423
Chaperonin Cpn60/TCP-1
PF00118 [1-74]T 5e-23 PF00118 Cpn60_TCP1 Cpn60_TCP1
PTHR11353 [1-81]T 2.6e-40 PTHR11353 CHAPERONIN CHAPERONIN
IPR008950
GroEL-like chaperone, ATPase
SSF48592 [1-70]T 8.1e-17 SSF48592 GroEL equatorial domain-like GroEL equatorial domain-like
no IPR
PTHR11353:SF23 [1-81]T 2.6e-40 PTHR11353:SF23 CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB

Subfamily ID: 5

SEQUENCE: tmon1135 LENGTH: 82 aa
IPR002423
Chaperonin Cpn60/TCP-1
PF00118 [1-75]T 5e-24 PF00118 Cpn60_TCP1 Cpn60_TCP1
PTHR11353 [1-82]T 1.1e-40 PTHR11353 CHAPERONIN CHAPERONIN
IPR008950
GroEL-like chaperone, ATPase
SSF48592 [1-71]T 1.5e-17 SSF48592 GroEL equatorial domain-like GroEL equatorial domain-like
no IPR
PTHR11353:SF23 [1-82]T 1.1e-40 PTHR11353:SF23 CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB

Subfamily ID: 6

SEQUENCE: zele17336 LENGTH: 112 aa
IPR002194
Chaperonin TCP-1
PS00751 [10-26]T 8e-5 PS00751 TCP1_2 TCP1_2
PS00995 [38-46]T 8e-5 PS00995 TCP1_3 TCP1_3
IPR002423
Chaperonin Cpn60/TCP-1
PF00118 [6-112]T 3e-38 PF00118 Cpn60_TCP1 Cpn60_TCP1
PR00304 [8-26]T 5e-14 PR00304 TCOMPLEXTCP1[38-57]T 5e-14 PR00304 TCOMPLEXTCP1 TCOMPLEXTCP1
PTHR11353 [2-112]T 2.5e-58 PTHR11353 CHAPERONIN CHAPERONIN
IPR008950
GroEL-like chaperone, ATPase
SSF48592 [2-96]T 5.1e-30 SSF48592 GroEL equatorial domain-like GroEL equatorial domain-like
no IPR
PTHR11353:SF23 [2-112]T 2.5e-58 PTHR11353:SF23 CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, BETA SUBUNIT, TCPB
Subfamily
1  2  3  4  5  6  

Sub family ID: 0
IPR001844: Chaperonin Cpn60
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR002423: Chaperonin Cpn60/TCP-1
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR008950: GroEL-like chaperone, ATPase
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0003754, chaperone activity
GO:0005524, ATP binding
 
Sub family ID: 1
IPR001844: Chaperonin Cpn60
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR002423: Chaperonin Cpn60/TCP-1
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR008950: GroEL-like chaperone, ATPase
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0003754, chaperone activity
GO:0005524, ATP binding
 
Sub family ID: 2
IPR002423: Chaperonin Cpn60/TCP-1
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR008950: GroEL-like chaperone, ATPase
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0003754, chaperone activity
GO:0005524, ATP binding
 
Sub family ID: 3
IPR002423: Chaperonin Cpn60/TCP-1
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR008950: GroEL-like chaperone, ATPase
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0003754, chaperone activity
GO:0005524, ATP binding
 
Sub family ID: 4
IPR002423: Chaperonin Cpn60/TCP-1
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR008950: GroEL-like chaperone, ATPase
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0003754, chaperone activity
GO:0005524, ATP binding
 
Sub family ID: 5
IPR002423: Chaperonin Cpn60/TCP-1
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR008950: GroEL-like chaperone, ATPase
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0003754, chaperone activity
GO:0005524, ATP binding
 
Sub family ID: 6
IPR002423: Chaperonin Cpn60/TCP-1
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR008950: GroEL-like chaperone, ATPase
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0003754, chaperone activity
GO:0005524, ATP binding
 
Department of Biology | University of North Carolina at Chapel Hill
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