Search results for family: 14793, total 7 Unipeptides retrieved.


Related families
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

View results sorted by

Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
bvul13525 TC454Beta vulgaris (sugarbeet) 
bvul18607 NP1333207Beta vulgaris (sugarbeet) 
bvul20533 TC95Beta vulgaris (sugarbeet) 
bvul21990  interProNP1333363Beta vulgaris (sugarbeet) 
bvul23212 TC1147Beta vulgaris (sugarbeet) 
zele18012 PUT-148a-Zinnia_elegans-10315755Zinnia elegans (zinnia) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
nrus9313  interProBP133164Nicotiana tabacum (common tobacco) 
Species
Beta vulgaris  Nicotiana tabacum  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Beta vulgaris (sugarbeet)  ( Select Species     Clear Species)
  bvul13525 TC4541
  bvul18607 NP13332071
  bvul20533 TC951
  bvul21990 NP13333631
  bvul23212 TC11471
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus9313 BP1331642
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele18012 PUT-148a-Zinnia_elegans-103157551
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: bvul21990 LENGTH: 284 aa
IPR004868
DNA polymerase type B, organellar and viral
PF03175 [11-71]T 1.3E-7 PF03175 DNA_pol_B_2 DNA_pol_B_2
IPR006172
DNA-directed DNA polymerase B
PS00116 [65-73]? 0.0 PS00116 DNA_POLYMERASE_B DNA_POLYMERASE_B

Subfamily ID: 2

SEQUENCE: nrus9313 LENGTH: 189 aa
IPR004868
DNA polymerase type B, organellar and viral
PF03175 [1-188]T 2.1e-42 PF03175 DNA_pol_B_2 DNA_pol_B_2
no IPR
SSF56672 [29-188]T 2.1e-13 SSF56672 DNA/RNA polymerases DNA/RNA polymerases
Subfamily
1  2  

Sub family ID: 1
IPR004868: DNA polymerase type B, organellar and viral
Biological ProcessGO:0006260, DNA replication
Molecular FunctionGO:0000166, nucleotide binding
GO:0003677, DNA binding
GO:0003887, DNA-directed DNA polymerase activity
GO:0008408, 3'-5' exonuclease activity
IPR006172: DNA-directed DNA polymerase B
Biological ProcessGO:0006260, DNA replication
Molecular FunctionGO:0000166, nucleotide binding
GO:0003677, DNA binding
GO:0003887, DNA-directed DNA polymerase activity
GO:0008408, 3'-5' exonuclease activity
 
Sub family ID: 2
IPR004868: DNA polymerase type B, organellar and viral
Biological ProcessGO:0006260, DNA replication
Molecular FunctionGO:0000166, nucleotide binding
GO:0003677, DNA binding
GO:0003887, DNA-directed DNA polymerase activity
GO:0008408, 3'-5' exonuclease activity
 
Department of Biology | University of North Carolina at Chapel Hill
Comments / Questions