Search results for family: 17817, total 5 Unipeptides retrieved.


Related families 3 families found.
Excluded Unipeptides View
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

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Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
ecal8894  interPro40146Eschscholzia californica (california poppy) 
lusi312 S_CA482816Linum usitatissimum (flax) 
peur2964 S_CX184267Populus euramericana () 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
ecal9786 42067Eschscholzia californica (california poppy) 
vvin28967  interProVvi.12341Vitis vinifera (wine grape) 
Species
Eschscholzia californica  Linum usitatissimum  Populus euramericana  Vitis vinifera  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Eschscholzia californica (california poppy)  ( Select Species     Clear Species)
  ecal8894 401461
  ecal9786 420672
Linum usitatissimum (flax)  ( Select Species     Clear Species)
  lusi312 S_CA4828161
Populus euramericana ()  ( Select Species     Clear Species)
  peur2964 S_CX1842671
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin28967 Vvi.123412
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: ecal8894 LENGTH: 155 aa
IPR002885
Pentatricopeptide repeat
PF01535 [73-107]T 5.8e-05 PF01535 PPR PPR
no IPR
PTHR10483 [11-155]T 2.2e-25 PTHR10483 PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN
SSF48452 [60-155]T 0.0017 SSF48452 TPR-like TPR-like

Subfamily ID: 2

SEQUENCE: vvin28967 LENGTH: 158 aa
IPR000871
Beta-lactamase, class A
PS00146 [99-114]? NA PS00146 BETA_LACTAMASE_A BETA_LACTAMASE_A
IPR002885
Pentatricopeptide repeat
PF01535 [63-97]T 0.0021 PF01535 PPR[99-133]T 1.8 PF01535 PPR PPR
TIGR00756 [63-98]T 0.00039 TIGR00756 PPR: pentatricopeptide repeat domain[99-133]T 0.13 TIGR00756 PPR: pentatricopeptide repeat domain PPR: pentatricopeptide repeat domain
IPR008940
Protein prenyltransferase
SSF48439 [36-158]T 5.6e-09 SSF48439 Protein prenylyltransferase Protein prenylyltransferase
no IPR
PTHR10483 [10-156]T 6.2e-33 PTHR10483 PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN
Subfamily
1  2  

Sub family ID: 2
IPR000871: Beta-lactamase, class A
Biological ProcessGO:0030655, beta-lactam antibiotic catabolism
GO:0046677, response to antibiotic
Molecular FunctionGO:0008800, beta-lactamase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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