Search results for family: 1799, total 20 Unipeptides retrieved.


Related families 2 families found.
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
atha81851  interProAt2g41540Arabidopsis thaliana (thale cress) 
atha88162 At3g07690Arabidopsis thaliana (thale cress) 
gmax81823 Gma.15768Glycine max (soybean) 
ghir46956 TC35906Gossypium hirsutum (cotton (tetraploid)) 
ghir62700 TC38740Gossypium hirsutum (cotton (tetraploid)) 
hpar1826 C_CF082240Helianthus paradoxus () 
osat210093 Os01g58740Oryza sativa (rice) 
osat211602 Os05g41590Oryza sativa (rice) 
pvir27 C_DN146268Panicum virgatum (switchgrass) 
stub44146 Stu.17334Solanum tuberosum (potato) 
spro3810 C_BG102822Sorghum propinquum () 
taes130012 Ta.33804Triticum aestivum (bread wheat) 
ttur919 C_AJ609883.8kTriticum turgidum (poulard wheat) 
zmay71543 Zm.5261Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
nadv2757  interPro354851Nuphar advena () 
osat190184 Os01g71280Oryza sativa (rice) 
pame2338 209569Persea americana (avocado) 
ptae31960 TC58278Pinus taeda (loblolly pine) 
ptae64366 TC58279Pinus taeda (loblolly pine) 
taes148922 Ta.7871Triticum aestivum (bread wheat) 
Species
Arabidopsis thaliana  Glycine max  Gossypium hirsutum  Helianthus paradoxus  Nuphar advena  Oryza sativa  Panicum virgatum  Persea americana  Pinus taeda  Solanum tuberosum  Sorghum propinquum  Triticum aestivum  Triticum turgidum  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha81851 At2g415401
  atha88162 At3g076901
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax81823 Gma.157681
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir46956 TC359061
  ghir62700 TC387401
Helianthus paradoxus ()  ( Select Species     Clear Species)
  hpar1826 C_CF0822401
Nuphar advena ()  ( Select Species     Clear Species)
  nadv2757 3548512
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat190184 Os01g712802
  osat210093 Os01g587401
  osat211602 Os05g415901
Panicum virgatum (switchgrass)  ( Select Species     Clear Species)
  pvir27 C_DN1462681
Persea americana (avocado)  ( Select Species     Clear Species)
  pame2338 2095692
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae31960 TC582782
  ptae64366 TC582792
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub44146 Stu.173341
Sorghum propinquum ()  ( Select Species     Clear Species)
  spro3810 C_BG1028221
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes130012 Ta.338041
  taes148922 Ta.78712
Triticum turgidum (poulard wheat)  ( Select Species     Clear Species)
  ttur919 C_AJ609883.8k1
Zea mays (corn)  ( Select Species     Clear Species)
  zmay71543 Zm.52611
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: atha81851 LENGTH: 462 aa
IPR006109
NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal
PF07479 [273-432]T 1.5E-48 PF07479 NAD_Gly3P_dh_C NAD_Gly3P_dh_C
IPR006168
NAD-dependent glycerol-3-phosphate dehydrogenase
PR00077 [46-63]T 2.7E-8 PR00077 GPDHDRGNASE[267-291]T 2.7E-8 PR00077 GPDHDRGNASE GPDHDRGNASE
PTHR11728 [38-119]T 6.6E-24 PTHR11728 NAD_Gly3P_dh[145-454]T 6.6E-24 PTHR11728 NAD_Gly3P_dh NAD_Gly3P_dh
IPR008927
6-phosphogluconate dehydrogenase, C-terminal-like
SSF48179 [274-447]T 3.73E-18 SSF48179 6DGDH_C_like 6DGDH_C_like
IPR011128
NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal
PF01210 [42-253]T 0.011 PF01210 NAD_Gly3P_dh_N NAD_Gly3P_dh_N

Subfamily ID: 2

SEQUENCE: nadv2757 LENGTH: 241 aa
IPR006109
NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal
PF07479 [54-213]T 8.7e-42 PF07479 NAD_Gly3P_dh_C NAD_Gly3P_dh_C
IPR006168
NAD-dependent glycerol-3-phosphate dehydrogenase
PR00077 [9-29]T 1.1e-08 PR00077 GPDHDRGNASE[48-72]T 1.1e-08 PR00077 GPDHDRGNASE[113-130]T 1.1e-08 PR00077 GPDHDRGNASE GPDHDRGNASE
PTHR11728 [5-223]T 6.2e-61 PTHR11728 GLYCEROL-3-PHOSPHATE DEHYDROGENASE GLYCEROL-3-PHOSPHATE DEHYDROGENASE
IPR008927
6-phosphogluconate dehydrogenase, C-terminal-like
SSF48179 [55-229]T 5.5e-28 SSF48179 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
no IPR
SSF51735 [2-54]T 1.2e-05 SSF51735 NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains
Subfamily
1  2  

Sub family ID: 0
IPR006109: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal
Biological ProcessGO:0005975, carbohydrate metabolism
Molecular FunctionGO:0016614, oxidoreductase activity, acting on CH-OH group of donors
IPR006168: NAD-dependent glycerol-3-phosphate dehydrogenase
Biological ProcessGO:0006072, glycerol-3-phosphate metabolism
Cellular ComponentGO:0009331, glycerol-3-phosphate dehydrogenase complex
Molecular FunctionGO:0004367, glycerol-3-phosphate dehydrogenase (NAD+) activity
IPR011128: NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal
Biological ProcessGO:0046168, glycerol-3-phosphate catabolism
Cellular ComponentGO:0005737, cytoplasm
 
Sub family ID: 1
IPR006109: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal
Biological ProcessGO:0005975, carbohydrate metabolism
Molecular FunctionGO:0016614, oxidoreductase activity, acting on CH-OH group of donors
IPR006168: NAD-dependent glycerol-3-phosphate dehydrogenase
Biological ProcessGO:0006072, glycerol-3-phosphate metabolism
Cellular ComponentGO:0009331, glycerol-3-phosphate dehydrogenase complex
Molecular FunctionGO:0004367, glycerol-3-phosphate dehydrogenase (NAD+) activity
IPR011128: NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal
Biological ProcessGO:0046168, glycerol-3-phosphate catabolism
Cellular ComponentGO:0005737, cytoplasm
 
Sub family ID: 2
IPR006109: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal
Biological ProcessGO:0005975, carbohydrate metabolism
Molecular FunctionGO:0016614, oxidoreductase activity, acting on CH-OH group of donors
IPR006168: NAD-dependent glycerol-3-phosphate dehydrogenase
Biological ProcessGO:0006072, glycerol-3-phosphate metabolism
Cellular ComponentGO:0009331, glycerol-3-phosphate dehydrogenase complex
Molecular FunctionGO:0004367, glycerol-3-phosphate dehydrogenase (NAD+) activity
 
Department of Biology | University of North Carolina at Chapel Hill
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