Search results for family: 18015, total 5 Unipeptides retrieved.


Related families 5 families found.
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

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Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
spro5351 S_BG559739Sorghum propinquum () 
ttur4380 S_AJ614615.8kTriticum turgidum (poulard wheat) 
vvin32579  interProVvi.13056Vitis vinifera (wine grape) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
ghir68753  interProCO073294Gossypium hirsutum (cotton (tetraploid)) 
grai1087 Gra.1117Gossypium raimondii () 
Species
Gossypium hirsutum  Gossypium raimondii  Sorghum propinquum  Triticum turgidum  Vitis vinifera  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir68753 CO0732942
Gossypium raimondii ()  ( Select Species     Clear Species)
  grai1087 Gra.11172
Sorghum propinquum ()  ( Select Species     Clear Species)
  spro5351 S_BG5597391
Triticum turgidum (poulard wheat)  ( Select Species     Clear Species)
  ttur4380 S_AJ614615.8k1
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin32579 Vvi.130561
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: vvin32579 LENGTH: 109 aa
IPR008985
Concanavalin A-like lectin/glucanase
SSF49899 [1-109]T 2.9e-10 SSF49899 Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases
IPR010713
Xyloglucan endo-transglycosylase, C-terminal
PF06955 [62-109]T 3e-11 PF06955 XET_C XET_C
no IPR
DOMAIN [1-109]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.

Subfamily ID: 2

SEQUENCE: ghir68753 LENGTH: 112 aa
IPR008985
Concanavalin A-like lectin/glucanase
SSF49899 [10-112]T 4.3e-11 SSF49899 Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases
IPR010713
Xyloglucan endo-transglycosylase, C-terminal
PF06955 [66-112]T 2.7e-05 PF06955 XET_C XET_C
Subfamily
1  2  

Sub family ID: 1
IPR010713: Xyloglucan endo-transglycosylase, C-terminal
Biological ProcessGO:0006073, glucan metabolism
Cellular ComponentGO:0005618, cell wall
GO:0048046, apoplast
Molecular FunctionGO:0016762, xyloglucan:xyloglucosyl transferase activity
 
Sub family ID: 2
IPR010713: Xyloglucan endo-transglycosylase, C-terminal
Biological ProcessGO:0006073, glucan metabolism
Cellular ComponentGO:0005618, cell wall
GO:0048046, apoplast
Molecular FunctionGO:0016762, xyloglucan:xyloglucosyl transferase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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