Search results for family: 187, total 145 Unipeptides retrieved.


Related families 63 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  3  4  5  6  7  8  9  10  11  12  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
acep14178  interProCF443565Allium cepa (onion) 
atha102210 At5g66750Arabidopsis thaliana (thale cress) 
atha105630 At3g12810Arabidopsis thaliana (thale cress) 
atha83331 At3g57300Arabidopsis thaliana (thale cress) 
cric3569 S_BE640981Ceratopteris richardii (water sprite) 
gmax85953 Gma.19725Glycine max (soybean) 
garb5472 S_BF279204Gossypium arboreum (tree cotton) 
ghir65605 BF279204Gossypium hirsutum (cotton (tetraploid)) 
ghir68519 TC28834Gossypium hirsutum (cotton (tetraploid)) 
hpar2570 S_CF085801Helianthus paradoxus () 
lsat48735 Lsa.4815Lactuca sativa (lettuce) 
ltul1119 248532Liriodendron tulipifera () 
mtru94523 TC106223Medicago truncatula (barrel medic) 
mtru99837 BE205152Medicago truncatula (barrel medic) 
nrus1799 BP129768Nicotiana tabacum (common tobacco) 
nadv1893 358426Nuphar advena () 
nadv765 354517Nuphar advena () 
osat137073 Os09g27060Oryza sativa (rice) 
osat144381 Os03g22900Oryza sativa (rice) 
osat154569 2504.m00248 Protein sequence may be in errorOryza sativa (rice) 
osat184345 9534.m00243 Protein sequence may be in errorOryza sativa (rice) 
pgin98 S_CN845893Panax ginseng (ginseng) 
pvul6822 PUT-148a-Phaseolus_vulgaris-8745Phaseolus vulgaris (common bean) 
ptae50734 TC78164Pinus taeda (loblolly pine) 
pdel1060 S_CX170355Populus deltoides () 
pdel4857 C_CX171225Populus deltoides () 
ptrc12550 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-15821Populus trichocarpa (western balsam poplar) 
ptrc15156 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-6504Populus trichocarpa (western balsam poplar) 
pmen1409 C_CN634785Pseudotsuga menziesii (Douglas-fir) 
shen4822 312532Saruma henryi () 
sreb3539 S_BG525244Stevia rebaudiana (stevia) 
taes140601 Ta.4945Triticum aestivum (bread wheat) 
taes148449 Ta.23819Triticum aestivum (bread wheat) 
ttur379 S_AJ612678.8kTriticum turgidum (poulard wheat) 
vshu4852 S_CV096626Vitis shuttleworthii (calloose grape) 
zaet208 S_AJ700629Zantedeschia aethiopica (calla-lilly) 
zmay60967 Zm.6312Zea mays (corn) 
zmay62876 Zm.10239Zea mays (corn) 
zmay73035 Zm.6916Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
acep12554  interProTC1686Allium cepa (onion) 
amaj1673 S_AJ796264Antirrhinum majus (snapdragon) 
amaj7864 S_AJ791902Antirrhinum majus (snapdragon) 
atha105887 At3g54280Arabidopsis thaliana (thale cress) 
atha83289 At2g18760Arabidopsis thaliana (thale cress) 
atha87109 At3g19210Arabidopsis thaliana (thale cress) 
atha96231 At1g03750Arabidopsis thaliana (thale cress) 
atha97129 At5g63950Arabidopsis thaliana (thale cress) 
cann11599 CO910470Capsicum annuum (pepper) 
ccle2995 PUT-148a-Citrus_clementina-4423Citrus clementina () 
ccle945 PUT-148a-Citrus_clementina-1407Citrus clementina () 
csin10323 Csi.6800Citrus sinensis (orange) 
cjap4887 S_AU299439Cryptomeria japonica (Japanese cedar) 
ecal6578 40382Eschscholzia californica (california poppy) 
ecal8503 41796Eschscholzia californica (california poppy) 
ghir76767 CO120349Gossypium hirsutum (cotton (tetraploid)) 
lsat45761 Lsa.1736Lactuca sativa (lettuce) 
lsat48176 Lsa.4234Lactuca sativa (lettuce) 
lesc64335 Les.7699Lycopersicon esculentum (tomato) 
lesc68138 Les.9525Lycopersicon esculentum (tomato) 
nrus436 BP134397Nicotiana tabacum (common tobacco) 
nadv141 353432Nuphar advena () 
osat176978 Os01g44990Oryza sativa (rice) 
osat191126 Os02g06590Oryza sativa (rice) 
osat204395 Os05g15890Oryza sativa (rice) 
osat204889 Os01g01310Oryza sativa (rice) 
osat207188 Os02g52510Oryza sativa (rice) 
osat209864 5389.m00121 Protein sequence may be in errorOryza sativa (rice) 
ptae38809 DR012131Pinus taeda (loblolly pine) 
ptae44594 TC71323Pinus taeda (loblolly pine) 
pdul935 S_BU645571Prunus dulcis (almond) 
pmen940 S_CN640066Pseudotsuga menziesii (Douglas-fir) 
taes140740 Ta.32501Triticum aestivum (bread wheat) 
vvin26539 Vvi.4565Vitis vinifera (wine grape) 
wmir4196 351867Welwitschia mirabilis () 
zmay63478 Zm.20000Zea mays (corn) 
zmay67114 Zm.4197Zea mays (corn) 
Subfamily ID: 3( Select Subfamily     Clear Subfamily)
aame3626  interPro283613Acorus americanus (sweetflag) 
amaj8157 S_AJ797222Antirrhinum majus (snapdragon) 
atha100196 At2g13370Arabidopsis thaliana (thale cress) 
atha108923 At2g25170Arabidopsis thaliana (thale cress) 
atha87158 At4g31900Arabidopsis thaliana (thale cress) 
atha91748 At5g18620Arabidopsis thaliana (thale cress) 
atha93113 At5g44800Arabidopsis thaliana (thale cress) 
atha95781 At3g06400Arabidopsis thaliana (thale cress) 
ecal7304 37602Eschscholzia californica (california poppy) 
lsat47828 Lsa.3873Lactuca sativa (lettuce) 
lsat52133 Lsa.8353Lactuca sativa (lettuce) 
mtru74048 TC109912Medicago truncatula (barrel medic) 
mtru90159 TC98472Medicago truncatula (barrel medic) 
mtru93974 TC96371Medicago truncatula (barrel medic) 
mtru97426 TC111820Medicago truncatula (barrel medic) 
osat130521 6805.m00119 Protein sequence may be in errorOryza sativa (rice) 
osat136398 Os05g05780Oryza sativa (rice) 
osat136666 Os07g31450Oryza sativa (rice) 
osat141180 5955.m00125 Protein sequence may be in errorOryza sativa (rice) 
osat152659 Os01g27040Oryza sativa (rice) 
osat155556 3498.m00124 Protein sequence may be in errorOryza sativa (rice) 
osat168982 5731.m00069 Protein sequence may be in errorOryza sativa (rice) 
osat177796 6519.m00136 Protein sequence may be in errorOryza sativa (rice) 
osat191419 2835.m00163 Protein sequence may be in errorOryza sativa (rice) 
osat196873 1895.m00077 Protein sequence may be in errorOryza sativa (rice) 
osat204632 2128.m00099 Protein sequence may be in errorOryza sativa (rice) 
osat215606 Os07g46590Oryza sativa (rice) 
ptae63017 TC65681Pinus taeda (loblolly pine) 
spro5876 S_BG051795Sorghum propinquum () 
taes146915 Ta.3492Triticum aestivum (bread wheat) 
wmir4407 352194Welwitschia mirabilis () 
zele11229 PUT-148a-Zinnia_elegans-5440Zinnia elegans (zinnia) 
Subfamily ID: 4( Select Subfamily     Clear Subfamily)
atha102817  interProAt2g44980Arabidopsis thaliana (thale cress) 
atha106612 At3g06010Arabidopsis thaliana (thale cress) 
atha81673 At2g46020Arabidopsis thaliana (thale cress) 
atha81709 At2g28290Arabidopsis thaliana (thale cress) 
atha90055 At5g19310Arabidopsis thaliana (thale cress) 
gmax79170 Gma.19537Glycine max (soybean) 
gsoj5829 PUT-148a-Glycine_soja-8940Glycine soja (wild soybean) 
hvul58054 Hv.10685Hordeum vulgare (barley) 
ltul1809 249479Liriodendron tulipifera () 
nrus9694 BP192631Nicotiana tabacum (common tobacco) 
omin364 C_CB210117Oryza minuta () 
osat138155 3352.m00112 Protein sequence may be in errorOryza sativa (rice) 
osat141354 3320.m00086 Protein sequence may be in errorOryza sativa (rice) 
osat146104 2498.m00149 Protein sequence may be in errorOryza sativa (rice) 
osat163211 4216.m00152 Protein sequence may be in errorOryza sativa (rice) 
osat184420 4270.m00116 Protein sequence may be in errorOryza sativa (rice) 
osat185423 1901.m00130 Protein sequence may be in errorOryza sativa (rice) 
osat206601 Os03g01200Oryza sativa (rice) 
pgin238 S_CN846600Panax ginseng (ginseng) 
ptae54168 TC62464Pinus taeda (loblolly pine) 
taes139293 Ta.38782Triticum aestivum (bread wheat) 
zmay73503 Zm.23600Zea mays (corn) 
zele15696 PUT-148a-Zinnia_elegans-12931Zinnia elegans (zinnia) 
Subfamily ID: 5( Select Subfamily     Clear Subfamily)
ccle4071  interProPUT-148a-Citrus_clementina-5995Citrus clementina () 
ghir61638 CO115854Gossypium hirsutum (cotton (tetraploid)) 
lsat49264 Lsa.5359Lactuca sativa (lettuce) 
msat388 S_CB858129Medicago sativa (alfalfa) 
osat187195 Os04g47830Oryza sativa (rice) 
Subfamily ID: 6( Select Subfamily     Clear Subfamily)
acep19756  interProCF446487Allium cepa (onion) 
osat170129 Os01g65850Oryza sativa (rice) 
ptae37182 AW011136Pinus taeda (loblolly pine) 
Subfamily ID: 7( Select Subfamily     Clear Subfamily)
pmen963  interProS_CN638662Pseudotsuga menziesii (Douglas-fir) 
Subfamily ID: 8( Select Subfamily     Clear Subfamily)
ptae63549  interProTC78788Pinus taeda (loblolly pine) 
Subfamily ID: 9( Select Subfamily     Clear Subfamily)
ptae63548  interProTC62115Pinus taeda (loblolly pine) 
Subfamily ID: 10( Select Subfamily     Clear Subfamily)
stub33546  interProStu.16291Solanum tuberosum (potato) 
Subfamily ID: 11( Select Subfamily     Clear Subfamily)
atha101611  interProAt2g02090Arabidopsis thaliana (thale cress) 
Subfamily ID: 12( Select Subfamily     Clear Subfamily)
mcry21426  interProBE131212Mesembryanthemum crystallinum (iceplant) 
Species
Acorus americanus  Allium cepa  Antirrhinum majus  Arabidopsis thaliana  Capsicum annuum  Ceratopteris richardii  Citrus clementina  Citrus sinensis  Cryptomeria japonica  Eschscholzia californica  Glycine max  Glycine soja  Gossypium arboreum  Gossypium hirsutum  Helianthus paradoxus  Hordeum vulgare  Lactuca sativa  Liriodendron tulipifera  Lycopersicon esculentum  Medicago sativa  Medicago truncatula  Mesembryanthemum crystallinum  Nicotiana tabacum  Nuphar advena  Oryza minuta  Oryza sativa  Panax ginseng  Phaseolus vulgaris  Pinus taeda  Populus deltoides  Populus trichocarpa  Prunus dulcis  Pseudotsuga menziesii  Saruma henryi  Solanum tuberosum  Sorghum propinquum  Stevia rebaudiana  Triticum aestivum  Triticum turgidum  Vitis shuttleworthii  Vitis vinifera  Welwitschia mirabilis  Zantedeschia aethiopica  Zea mays  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame3626 2836133
Allium cepa (onion)  ( Select Species     Clear Species)
  acep12554 TC16862
  acep14178 CF4435651
  acep19756 CF4464876
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj1673 S_AJ7962642
  amaj7864 S_AJ7919022
  amaj8157 S_AJ7972223
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha100196 At2g133703
  atha101611 At2g0209011
  atha102210 At5g667501
  atha102817 At2g449804
  atha105630 At3g128101
  atha105887 At3g542802
  atha106612 At3g060104
  atha108923 At2g251703
  atha81673 At2g460204
  atha81709 At2g282904
  atha83289 At2g187602
  atha83331 At3g573001
  atha87109 At3g192102
  atha87158 At4g319003
  atha90055 At5g193104
  atha91748 At5g186203
  atha93113 At5g448003
  atha95781 At3g064003
  atha96231 At1g037502
  atha97129 At5g639502
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann11599 CO9104702
Ceratopteris richardii (water sprite)  ( Select Species     Clear Species)
  cric3569 S_BE6409811
Citrus clementina ()  ( Select Species     Clear Species)
  ccle2995 PUT-148a-Citrus_clementina-44232
  ccle4071 PUT-148a-Citrus_clementina-59955
  ccle945 PUT-148a-Citrus_clementina-14072
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin10323 Csi.68002
Cryptomeria japonica (Japanese cedar)  ( Select Species     Clear Species)
  cjap4887 S_AU2994392
Eschscholzia californica (california poppy)  ( Select Species     Clear Species)
  ecal6578 403822
  ecal7304 376023
  ecal8503 417962
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax79170 Gma.195374
  gmax85953 Gma.197251
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj5829 PUT-148a-Glycine_soja-89404
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb5472 S_BF2792041
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir61638 CO1158545
  ghir65605 BF2792041
  ghir68519 TC288341
  ghir76767 CO1203492
Helianthus paradoxus ()  ( Select Species     Clear Species)
  hpar2570 S_CF0858011
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul58054 Hv.106854
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat45761 Lsa.17362
  lsat47828 Lsa.38733
  lsat48176 Lsa.42342
  lsat48735 Lsa.48151
  lsat49264 Lsa.53595
  lsat52133 Lsa.83533
Liriodendron tulipifera ()  ( Select Species     Clear Species)
  ltul1119 2485321
  ltul1809 2494794
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc64335 Les.76992
  lesc68138 Les.95252
Medicago sativa (alfalfa)  ( Select Species     Clear Species)
  msat388 S_CB8581295
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru74048 TC1099123
  mtru90159 TC984723
  mtru93974 TC963713
  mtru94523 TC1062231
  mtru97426 TC1118203
  mtru99837 BE2051521
Mesembryanthemum crystallinum (iceplant)  ( Select Species     Clear Species)
  mcry21426 BE13121212
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus1799 BP1297681
  nrus436 BP1343972
  nrus9694 BP1926314
Nuphar advena ()  ( Select Species     Clear Species)
  nadv141 3534322
  nadv1893 3584261
  nadv765 3545171
Oryza minuta ()  ( Select Species     Clear Species)
  omin364 C_CB2101174
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat130521 6805.m00119 Protein sequence may be in error3
  osat136398 Os05g057803
  osat136666 Os07g314503
  osat137073 Os09g270601
  osat138155 3352.m00112 Protein sequence may be in error4
  osat141180 5955.m00125 Protein sequence may be in error3
  osat141354 3320.m00086 Protein sequence may be in error4
  osat144381 Os03g229001
  osat146104 2498.m00149 Protein sequence may be in error4
  osat152659 Os01g270403
  osat154569 2504.m00248 Protein sequence may be in error1
  osat155556 3498.m00124 Protein sequence may be in error3
  osat163211 4216.m00152 Protein sequence may be in error4
  osat168982 5731.m00069 Protein sequence may be in error3
  osat170129 Os01g658506
  osat176978 Os01g449902
  osat177796 6519.m00136 Protein sequence may be in error3
  osat184345 9534.m00243 Protein sequence may be in error1
  osat184420 4270.m00116 Protein sequence may be in error4
  osat185423 1901.m00130 Protein sequence may be in error4
  osat187195 Os04g478305
  osat191126 Os02g065902
  osat191419 2835.m00163 Protein sequence may be in error3
  osat196873 1895.m00077 Protein sequence may be in error3
  osat204395 Os05g158902
  osat204632 2128.m00099 Protein sequence may be in error3
  osat204889 Os01g013102
  osat206601 Os03g012004
  osat207188 Os02g525102
  osat209864 5389.m00121 Protein sequence may be in error2
  osat215606 Os07g465903
Panax ginseng (ginseng)  ( Select Species     Clear Species)
  pgin238 S_CN8466004
  pgin98 S_CN8458931
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul6822 PUT-148a-Phaseolus_vulgaris-87451
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae37182 AW0111366
  ptae38809 DR0121312
  ptae44594 TC713232
  ptae50734 TC781641
  ptae54168 TC624644
  ptae63017 TC656813
  ptae63548 TC621159
  ptae63549 TC787888
Populus deltoides ()  ( Select Species     Clear Species)
  pdel1060 S_CX1703551
  pdel4857 C_CX1712251
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc12550 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-158211
  ptrc15156 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-65041
Prunus dulcis (almond)  ( Select Species     Clear Species)
  pdul935 S_BU6455712
Pseudotsuga menziesii (Douglas-fir)  ( Select Species     Clear Species)
  pmen1409 C_CN6347851
  pmen940 S_CN6400662
  pmen963 S_CN6386627
Saruma henryi ()  ( Select Species     Clear Species)
  shen4822 3125321
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub33546 Stu.1629110
Sorghum propinquum ()  ( Select Species     Clear Species)
  spro5876 S_BG0517953
Stevia rebaudiana (stevia)  ( Select Species     Clear Species)
  sreb3539 S_BG5252441
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes139293 Ta.387824
  taes140601 Ta.49451
  taes140740 Ta.325012
  taes146915 Ta.34923
  taes148449 Ta.238191
Triticum turgidum (poulard wheat)  ( Select Species     Clear Species)
  ttur379 S_AJ612678.8k1
Vitis shuttleworthii (calloose grape)  ( Select Species     Clear Species)
  vshu4852 S_CV0966261
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin26539 Vvi.45652
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir4196 3518672
  wmir4407 3521943
Zantedeschia aethiopica (calla-lilly)  ( Select Species     Clear Species)
  zaet208 S_AJ7006291
Zea mays (corn)  ( Select Species     Clear Species)
  zmay60967 Zm.63121
  zmay62876 Zm.102391
  zmay63478 Zm.200002
  zmay67114 Zm.41972
  zmay73035 Zm.69161
  zmay73503 Zm.236004
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele11229 PUT-148a-Zinnia_elegans-54403
  zele15696 PUT-148a-Zinnia_elegans-129314
Subfamily
1  2  3  4  5  6  7  8  9  10  11  12  

Subfamily ID: 1

SEQUENCE: acep14178 LENGTH: 206 aa
IPR001650
Helicase, C-terminal
PF00271 [40-119]T 3.2e-32 PF00271 Helicase_C Helicase_C
SM00490 [35-119]T 4.7e-25 SM00490 no description no description
no IPR
PTHR10799 [1-206]T 1.6e-89 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF76 [1-206]T 1.6e-89 PTHR10799:SF76 HELICASE BRAHMA(D. MELANOGASTER)-RELATED HELICASE BRAHMA(D. MELANOGASTER)-RELATED
SSF52540 [1-156]T 9.2e-33 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 2

SEQUENCE: acep12554 LENGTH: 293 aa
IPR001650
Helicase, C-terminal
PF00271 [36-115]T 2.8e-27 PF00271 Helicase_C Helicase_C
SM00490 [31-115]T 4.7e-20 SM00490 no description no description
no IPR
PTHR10799 [1-195]T 2.8e-110 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF66 [1-195]T 2.8e-110 PTHR10799:SF66 DNA REPAIR AND RECOMBINATION PROTEIN RAD54-RELATED DNA REPAIR AND RECOMBINATION PROTEIN RAD54-RELATED
SSF52540 [1-152]T 1.2e-26 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 3

SEQUENCE: aame3626 LENGTH: 126 aa
IPR001650
Helicase, C-terminal
PF00271 [1-25]T 1.8e-09 PF00271 Helicase_C Helicase_C
no IPR
PTHR10799 [1-124]T 5.5e-53 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF64 [1-124]T 5.5e-53 PTHR10799:SF64 CHROMODOMAIN HELICASE DNA BINDING PROTEIN CHROMODOMAIN HELICASE DNA BINDING PROTEIN
SSF52540 [1-47]T 4.4e-13 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 4

SEQUENCE: atha102817 LENGTH: 870 aa
IPR000330
SNF2-related
PF00176 [54-358]T 9.299999999999999E-80 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [412-501]T 8.0E-19 PF00271 Helicase_C Helicase_C
SM00490 [407-501]T 2.0E-18 SM00490 HELICc HELICc
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [47-247]T 4.0000000000000003E-28 SM00487 DEXDc DEXDc

Subfamily ID: 5

SEQUENCE: ccle4071 LENGTH: 210 aa
IPR001650
Helicase, C-terminal
PF00271 [34-112]T 1.1e-27 PF00271 Helicase_C Helicase_C
SM00490 [29-112]T 1.4e-20 SM00490 no description no description
no IPR
DOMAIN [1-127]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
PTHR10799 [4-120]T 3.5e-72 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[157-186]T 3.5e-72 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF75 [4-120]T 3.5e-72 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED[157-186]T 3.5e-72 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED HELICASE SWR1(YEAST)-RELATED
SSF52540 [2-141]T 2.1e-27 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases
TRANSMEM [128-149]T TRANSMEM TRANSMEM TRANSMEM

Subfamily ID: 6

SEQUENCE: acep19756 LENGTH: 193 aa
IPR001650
Helicase, C-terminal
PF00271 [12-61]T 1.7e-13 PF00271 Helicase_C Helicase_C
SM00490 [7-81]T 9.4e-11 SM00490 no description no description
no IPR
PTHR10799 [1-118]T 9.1e-49 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF76 [1-118]T 9.1e-49 PTHR10799:SF76 HELICASE BRAHMA(D. MELANOGASTER)-RELATED HELICASE BRAHMA(D. MELANOGASTER)-RELATED
SSF52540 [1-118]T 3e-19 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 7

SEQUENCE: pmen963 LENGTH: 89 aa
IPR001650
Helicase, C-terminal
PF00271 [1-78]T 1.2e-25 PF00271 Helicase_C Helicase_C
SM00490 [2-78]T 8.7e-15 SM00490 no description no description
no IPR
PTHR10799 [1-89]T 6.5e-48 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF75 [1-89]T 6.5e-48 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED HELICASE SWR1(YEAST)-RELATED
SSF52540 [1-88]T 6.3e-19 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 8

SEQUENCE: ptae63549 LENGTH: 357 aa
IPR000330
SNF2-related
PF00176 [74-213]T 2.1e-18 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [271-348]T 7.1e-22 PF00271 Helicase_C Helicase_C
SM00490 [266-348]T 3.3e-15 SM00490 no description no description
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [45-233]T 3.1e-11 SM00487 no description no description
no IPR
PTHR10799 [49-63]T 2.4e-71 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[85-356]T 2.4e-71 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF75 [49-63]T 2.4e-71 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED[85-356]T 2.4e-71 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED HELICASE SWR1(YEAST)-RELATED
SSF52540 [44-215]T 2.2e-08 SSF52540 P-loop containing nucleoside triphosphate hydrolases[220-356]T 1.8e-22 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 9

SEQUENCE: ptae63548 LENGTH: 128 aa
IPR001650
Helicase, C-terminal
PF00271 [4-68]T 6.5e-19 PF00271 Helicase_C Helicase_C
SM00490 [1-68]T 0.00095 SM00490 no description no description
no IPR
PTHR10799 [4-106]T 5.1e-46 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF75 [4-106]T 5.1e-46 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED HELICASE SWR1(YEAST)-RELATED
SSF52540 [4-90]T 4.4e-19 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 10

SEQUENCE: stub33546 LENGTH: 261 aa
IPR001650
Helicase, C-terminal
PF00271 [123-201]T 1.7e-27 PF00271 Helicase_C Helicase_C
SM00490 [118-201]T 3.4e-20 SM00490 no description no description
no IPR
PTHR10799 [6-22]T 6.7e-79 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[51-63]T 6.7e-79 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[83-239]T 6.7e-79 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF75 [6-22]T 6.7e-79 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED[51-63]T 6.7e-79 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED[83-239]T 6.7e-79 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED HELICASE SWR1(YEAST)-RELATED
SSF52540 [83-231]T 5.3e-30 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 11

SEQUENCE: atha101611 LENGTH: 763 aa
IPR000330
SNF2-related
PF00176 [216-520]T 7.200000000000001E-73 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [623-701]T 1.2E-21 PF00271 Helicase_C Helicase_C
SM00490 [618-701]T 1.1E-20 SM00490 HELICc HELICc
IPR001844
Chaperonin Cpn60
PS00296 [130-141]? 0.0 PS00296 CHAPERONINS_CPN60 CHAPERONINS_CPN60
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [209-414]T 3.1999999999999995E-36 SM00487 DEXDc DEXDc

Subfamily ID: 12

SEQUENCE: mcry21426 LENGTH: 245 aa
IPR000330
SNF2-related
PF00176 [9-28]T 0.00066 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [131-209]T 8.2e-28 PF00271 Helicase_C Helicase_C
SM00490 [126-209]T 1.6e-20 SM00490 no description no description
no IPR
PTHR10799 [13-29]T 1.8e-81 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[58-70]T 1.8e-81 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[91-245]T 1.8e-81 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF75 [13-29]T 1.8e-81 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED[58-70]T 1.8e-81 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED[91-245]T 1.8e-81 PTHR10799:SF75 HELICASE SWR1(YEAST)-RELATED HELICASE SWR1(YEAST)-RELATED
SSF52540 [73-237]T 8.3e-32 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases
Subfamily
1  2  3  4  5  6  7  8  9  10  11  12  

Sub family ID: 0
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
 
Sub family ID: 1
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 2
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 3
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 4
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 5
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 6
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 7
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 8
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 9
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 10
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 11
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR001844: Chaperonin Cpn60
Molecular FunctionGO:0005515, protein binding
GO:0005524, ATP binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 12
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Department of Biology | University of North Carolina at Chapel Hill
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