Search results for family: 18814, total 5 Unipeptides retrieved.


Related families 3 families found.
Excluded Unipeptides View
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
pgla320  interProTC7090Picea glauca (white spruce) 
pgla976 CO478741Picea glauca (white spruce) 
ptae32691 TC58161Pinus taeda (loblolly pine) 
ptae57736 DN610403Pinus taeda (loblolly pine) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
ptae34056  interProTC65209Pinus taeda (loblolly pine) 
Species
Picea glauca  Pinus taeda  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla320 TC70901
  pgla976 CO4787411
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae32691 TC581611
  ptae34056 TC652092
  ptae57736 DN6104031
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: pgla320 LENGTH: 96 aa
IPR006044
11-S plant seed storage protein
PR00439 [4-19]T 4.1e-18 PR00439 11SGLOBULIN[22-40]T 4.1e-18 PR00439 11SGLOBULIN[44-61]T 4.1e-18 PR00439 11SGLOBULIN 11SGLOBULIN
IPR006045
Cupin 1
PF00190 [1-67]T 2e-16 PF00190 Cupin_1 Cupin_1
IPR011051
Cupin, RmlC-type
SSF51182 [1-91]T 5.3e-19 SSF51182 RmlC-like cupins RmlC-like cupins

Subfamily ID: 2

SEQUENCE: ptae34056 LENGTH: 252 aa
IPR006044
11-S plant seed storage protein
PR00439 [86-103]T 1.8e-09 PR00439 11SGLOBULIN[109-129]T 1.8e-09 PR00439 11SGLOBULIN 11SGLOBULIN
IPR006045
Cupin 1
PF00190 [87-208]T 1.1e-21 PF00190 Cupin_1 Cupin_1
IPR011051
Cupin, RmlC-type
SSF51182 [1-45]T 4.6e-07 SSF51182 RmlC-like cupins[80-233]T 2.2e-27 SSF51182 RmlC-like cupins RmlC-like cupins
Subfamily
1  2  

Sub family ID: 1
IPR006044: 11-S plant seed storage protein
Molecular FunctionGO:0045735, nutrient reservoir activity
IPR006045: Cupin
Molecular FunctionGO:0045735, nutrient reservoir activity
 
Sub family ID: 2
IPR006044: 11-S plant seed storage protein
Molecular FunctionGO:0045735, nutrient reservoir activity
IPR006045: Cupin
Molecular FunctionGO:0045735, nutrient reservoir activity
 
Department of Biology | University of North Carolina at Chapel Hill
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