Search results for family: 1925, total 49 Unipeptides retrieved.


Related families 18 families found.
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
atha106009  interProAt5g51810Arabidopsis thaliana (thale cress) 
atha84904 At5g07200Arabidopsis thaliana (thale cress) 
atha90512 At1g60980Arabidopsis thaliana (thale cress) 
atha94765 At4g25420Arabidopsis thaliana (thale cress) 
bvul15022 TC2139Beta vulgaris (sugarbeet) 
bnap15856 Bna.2552Brassica napus (rapeseed) 
bnap16564 Bna.3289Brassica napus (rapeseed) 
garb4922 C_BQ407287Gossypium arboreum (tree cotton) 
ghir58682 TC32862Gossypium hirsutum (cotton (tetraploid)) 
ghir73511 NP1130082Gossypium hirsutum (cotton (tetraploid)) 
lsat44221 Lsa.82Lactuca sativa (lettuce) 
lsat44229 Lsa.90Lactuca sativa (lettuce) 
lsat44230 Lsa.91Lactuca sativa (lettuce) 
lesc60283 Les.63Lycopersicon esculentum (tomato) 
lesc60284 Les.64Lycopersicon esculentum (tomato) 
lesc60285 Les.65Lycopersicon esculentum (tomato) 
lesc70842 Les.13573Lycopersicon esculentum (tomato) 
mtru90804 TC109031Medicago truncatula (barrel medic) 
nrus1828 NP917366Nicotiana tabacum (common tobacco) 
nrus8149 TC2100Nicotiana tabacum (common tobacco) 
pcoc7194 C_CA899676Phaseolus coccineus () 
pvul3965 PUT-148a-Phaseolus_vulgaris-5155Phaseolus vulgaris (common bean) 
pvul5530 PUT-148a-Phaseolus_vulgaris-7124Phaseolus vulgaris (common bean) 
pvul7881 PUT-148a-Phaseolus_vulgaris-10091Phaseolus vulgaris (common bean) 
peur1516 C_CX183509Populus euramericana () 
ptrc13108 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-4322Populus trichocarpa (western balsam poplar) 
pdul637 C_BU573979Prunus dulcis (almond) 
stub33589 Stu.20Solanum tuberosum (potato) 
stub41611 Stu.22Solanum tuberosum (potato) 
stub44977 Stu.21Solanum tuberosum (potato) 
vvin26358 Vvi.4209Vitis vinifera (wine grape) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
acep21972  interProCF447059Allium cepa (onion) 
atha96635 At1g44090Arabidopsis thaliana (thale cress) 
ghir53212 TC40878Gossypium hirsutum (cotton (tetraploid)) 
hvul50745 Hv.2117Hordeum vulgare (barley) 
hvul53623 Hv.13572Hordeum vulgare (barley) 
osat131461 Os01g66100Oryza sativa (rice) 
osat135776 5033.m00133 Protein sequence may be in errorOryza sativa (rice) 
osat146648 Os03g63970Oryza sativa (rice) 
osat169388 2600.m00124 Protein sequence may be in errorOryza sativa (rice) 
osat188060 6726.m00178 Protein sequence may be in errorOryza sativa (rice) 
osat190764 Os07g07420Oryza sativa (rice) 
ptrc10176 PUT-148a-Populus_trichocarpa-12821215Populus trichocarpa (western balsam poplar) 
ptrc7742 PUT-148a-Populus_trichocarpa-12821216Populus trichocarpa (western balsam poplar) 
stub43979 Stu.16992Solanum tuberosum (potato) 
taes128003 Ta.141Triticum aestivum (bread wheat) 
taes142022 Ta.23668Triticum aestivum (bread wheat) 
taes145819 Ta.23667Triticum aestivum (bread wheat) 
zmay68717 Zm.3184Zea mays (corn) 
Species
Allium cepa  Arabidopsis thaliana  Beta vulgaris  Brassica napus  Gossypium arboreum  Gossypium hirsutum  Hordeum vulgare  Lactuca sativa  Lycopersicon esculentum  Medicago truncatula  Nicotiana tabacum  Oryza sativa  Phaseolus coccineus  Phaseolus vulgaris  Populus euramericana  Populus trichocarpa  Prunus dulcis  Solanum tuberosum  Triticum aestivum  Vitis vinifera  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Allium cepa (onion)  ( Select Species     Clear Species)
  acep21972 CF4470592
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha106009 At5g518101
  atha84904 At5g072001
  atha90512 At1g609801
  atha94765 At4g254201
  atha96635 At1g440902
Beta vulgaris (sugarbeet)  ( Select Species     Clear Species)
  bvul15022 TC21391
Brassica napus (rapeseed)  ( Select Species     Clear Species)
  bnap15856 Bna.25521
  bnap16564 Bna.32891
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb4922 C_BQ4072871
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir53212 TC408782
  ghir58682 TC328621
  ghir73511 NP11300821
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul50745 Hv.21172
  hvul53623 Hv.135722
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat44221 Lsa.821
  lsat44229 Lsa.901
  lsat44230 Lsa.911
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc60283 Les.631
  lesc60284 Les.641
  lesc60285 Les.651
  lesc70842 Les.135731
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru90804 TC1090311
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus1828 NP9173661
  nrus8149 TC21001
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat131461 Os01g661002
  osat135776 5033.m00133 Protein sequence may be in error2
  osat146648 Os03g639702
  osat169388 2600.m00124 Protein sequence may be in error2
  osat188060 6726.m00178 Protein sequence may be in error2
  osat190764 Os07g074202
Phaseolus coccineus ()  ( Select Species     Clear Species)
  pcoc7194 C_CA8996761
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul3965 PUT-148a-Phaseolus_vulgaris-51551
  pvul5530 PUT-148a-Phaseolus_vulgaris-71241
  pvul7881 PUT-148a-Phaseolus_vulgaris-100911
Populus euramericana ()  ( Select Species     Clear Species)
  peur1516 C_CX1835091
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc10176 PUT-148a-Populus_trichocarpa-128212152
  ptrc13108 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-43221
  ptrc7742 PUT-148a-Populus_trichocarpa-128212162
Prunus dulcis (almond)  ( Select Species     Clear Species)
  pdul637 C_BU5739791
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub33589 Stu.201
  stub41611 Stu.221
  stub43979 Stu.169922
  stub44977 Stu.211
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes128003 Ta.1412
  taes142022 Ta.236682
  taes145819 Ta.236672
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin26358 Vvi.42091
Zea mays (corn)  ( Select Species     Clear Species)
  zmay68717 Zm.31842
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: atha106009 LENGTH: 378 aa
IPR001412
Aminoacyl-tRNA synthetase, class I
PS00178 [232-243]F 0.0 PS00178 AA_TRNA_LIGASE_I AA_TRNA_LIGASE_I
IPR002283
Isopenicillin N synthase
PR00682 [81-98]T 1.1E-10 PR00682 IPNSYNTHASE[245-266]T 1.1E-10 PR00682 IPNSYNTHASE[280-306]T 1.1E-10 PR00682 IPNSYNTHASE IPNSYNTHASE
IPR005123
2OG-Fe(II) oxygenase
PF03171 [221-320]T 2.0000000000000002E-44 PF03171 2OG-FeII_Oxy 2OG-FeII_Oxy

Subfamily ID: 2

SEQUENCE: acep21972 LENGTH: 271 aa
IPR002283
Isopenicillin N synthase
PR00682 [2-19]T 4.8e-09 PR00682 IPNSYNTHASE[166-187]T 4.8e-09 PR00682 IPNSYNTHASE[201-227]T 4.8e-09 PR00682 IPNSYNTHASE[261-279]T 4.8e-09 PR00682 IPNSYNTHASE IPNSYNTHASE
IPR005123
2OG-Fe(II) oxygenase
PF03171 [142-241]T 1.3e-45 PF03171 2OG-FeII_Oxy 2OG-FeII_Oxy
no IPR
PTHR10209 [1-271]T 2.6e-171 PTHR10209 FE(II)/ ASCORBATE OXIDASE SUPERFAMILY FE(II)/ ASCORBATE OXIDASE SUPERFAMILY
PTHR10209:SF10 [1-271]T 2.6e-171 PTHR10209:SF10 GIBBERELLIN 20-OXIDASE GIBBERELLIN 20-OXIDASE
SSF51197 [1-271]T 4.1e-82 SSF51197 Clavaminate synthase-like Clavaminate synthase-like
Subfamily
1  2  

Sub family ID: 1
IPR001412: Aminoacyl-tRNA synthetase, class I
Biological ProcessGO:0006418, tRNA aminoacylation for protein translation
Molecular FunctionGO:0004812, tRNA ligase activity
GO:0005524, ATP binding
IPR002283: Isopenicillin N synthase
Biological ProcessGO:0017000, antibiotic biosynthesis
Molecular FunctionGO:0005506, iron ion binding
GO:0016216, isopenicillin-N synthase activity
 
Sub family ID: 2
IPR002283: Isopenicillin N synthase
Biological ProcessGO:0017000, antibiotic biosynthesis
Molecular FunctionGO:0005506, iron ion binding
GO:0016216, isopenicillin-N synthase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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