Search results for family: 2005, total 66 Unipeptides retrieved.


Related families 2 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

View results sorted by

Subfamily
1  2  3  4  5  6  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
amaj2927  interProC_AJ801298Antirrhinum majus (snapdragon) 
atha106722 At5g42040Arabidopsis thaliana (thale cress) 
atha92573 At1g64520Arabidopsis thaliana (thale cress) 
bvul23109 TC1577Beta vulgaris (sugarbeet) 
bnap15027 Bna.1664Brassica napus (rapeseed) 
bgym1273 C_BP938903Bruguiera gymnorhiza () 
cann19534 CA519362Capsicum annuum (pepper) 
ccle67 PUT-148a-Citrus_clementina-90Citrus clementina () 
csin11670 Csi.8225Citrus sinensis (orange) 
etir3753 S_BP955018Euphorbia tirucalli () 
ghyb5191 328878Gerbera hybrid.cultivar () 
gmax82585 Gma.4383Glycine max (soybean) 
garb1824 C_BQ414198Gossypium arboreum (tree cotton) 
ghir77406 TC37617Gossypium hirsutum (cotton (tetraploid)) 
lsat49435 Lsa.5533Lactuca sativa (lettuce) 
lesc64832 Les.12332Lycopersicon esculentum (tomato) 
mdom2876 Mdo.3685Malus x.domestica (apple) 
mesc4491 C_CK651277Manihot esculenta (cassava) 
mtru84234 TC100673Medicago truncatula (barrel medic) 
mgut1672 MgU4122Mimulus guttatus (spotted monkey flower) 
phyb241 C_CV293431Petunia x.hybrida (petunia) 
pcoc11904 C_CA898181Phaseolus coccineus () 
pvul7278 PUT-148a-Phaseolus_vulgaris-9325Phaseolus vulgaris (common bean) 
ptri398 C_CD576084Poncirus trifoliata () 
palb13248 Contig856Populus alba (white poplar) 
palb3511 C_CX657695Populus alba (white poplar) 
palb6767 C_CX659238Populus alba (white poplar) 
pbal144 Pba.166Populus balsamifera (balsam poplar) 
pdel4771 C_CK317930Populus deltoides () 
peup1864 S_AJ779206Populus euphratica () 
peur862 S_CX181501Populus euramericana () 
pers11034 C_BU040863Prunus persica (peach) 
stub44858 Stu.5824Solanum tuberosum (potato) 
sreb5792 S_BG525186Stevia rebaudiana (stevia) 
tver572 C_BE574813Triphysaria versicolor () 
vcor43 295675Vaccinium corymbosum (American blueberry) 
vshu873 C_CV094184Vitis shuttleworthii (calloose grape) 
vvin25962 Vvi.3493Vitis vinifera (wine grape) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
acom95  interProC_CO731002Ananas comosus (pineapple) 
aoff435 230933Asparagus officinalis (garden asparagus) 
hvul49618 Hv.608Hordeum vulgare (barley) 
nadv2483 353137Nuphar advena () 
nadv2996 355216Nuphar advena () 
osat147495 Os07g25420Oryza sativa (rice) 
osat170508 4718.m00143 Protein sequence may be in errorOryza sativa (rice) 
pvir3393 S_DN143217Panicum virgatum (switchgrass) 
pame2999 210203Persea americana (avocado) 
soff2585 Sof.3275Saccharum officinarum (sugar cane) 
shen2299 309452Saruma henryi () 
sorg42142 Sbi.3600Sorghum bicolor (sorghum) 
taes125072 Ta.2555Triticum aestivum (bread wheat) 
tmon4657 PUT-148a-Triticum_monococcum-46841Triticum monococcum (einkorn wheat) 
ttur1777 S_AJ610733.8kTriticum turgidum (poulard wheat) 
zaet97 S_AJ703344Zantedeschia aethiopica (calla-lilly) 
zmay63293 Zm.6666Zea mays (corn) 
Subfamily ID: 3( Select Subfamily     Clear Subfamily)
atri6188  interPro196070Amborella trichopoda (amborella) 
cric3795 S_BQ086939Ceratopteris richardii (water sprite) 
ppat24622 Ppa.1540Physcomitrella patens () 
ppat27832 Ppa.5819Physcomitrella patens () 
pgla17339 TC867Picea glauca (white spruce) 
ppis3777 C_BX682587Pinus pinaster (maritime pine) 
ptae65630 TC74819Pinus taeda (loblolly pine) 
wmir435 347143Welwitschia mirabilis () 
Subfamily ID: 4( Select Subfamily     Clear Subfamily)
taes140842  interProTa.37833Triticum aestivum (bread wheat) 
Subfamily ID: 5( Select Subfamily     Clear Subfamily)
aame291  interPro279826Acorus americanus (sweetflag) 
Subfamily ID: 6( Select Subfamily     Clear Subfamily)
ptae45508  interProCV036233Pinus taeda (loblolly pine) 
Species
Acorus americanus  Amborella trichopoda  Ananas comosus  Antirrhinum majus  Arabidopsis thaliana  Asparagus officinalis  Beta vulgaris  Brassica napus  Bruguiera gymnorhiza  Capsicum annuum  Ceratopteris richardii  Citrus clementina  Citrus sinensis  Euphorbia tirucalli  Gerbera hybrid.cultivar  Glycine max  Gossypium arboreum  Gossypium hirsutum  Hordeum vulgare  Lactuca sativa  Lycopersicon esculentum  Malus x.domestica  Manihot esculenta  Medicago truncatula  Mimulus guttatus  Nuphar advena  Oryza sativa  Panicum virgatum  Persea americana  Petunia x.hybrida  Phaseolus coccineus  Phaseolus vulgaris  Physcomitrella patens  Picea glauca  Pinus pinaster  Pinus taeda  Poncirus trifoliata  Populus alba  Populus balsamifera  Populus deltoides  Populus euphratica  Populus euramericana  Prunus persica  Saccharum officinarum  Saruma henryi  Solanum tuberosum  Sorghum bicolor  Stevia rebaudiana  Triphysaria versicolor  Triticum aestivum  Triticum monococcum  Triticum turgidum  Vaccinium corymbosum  Vitis shuttleworthii  Vitis vinifera  Welwitschia mirabilis  Zantedeschia aethiopica  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame291 2798265
Amborella trichopoda (amborella)  ( Select Species     Clear Species)
  atri6188 1960703
Ananas comosus (pineapple)  ( Select Species     Clear Species)
  acom95 C_CO7310022
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj2927 C_AJ8012981
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha106722 At5g420401
  atha92573 At1g645201
Asparagus officinalis (garden asparagus)  ( Select Species     Clear Species)
  aoff435 2309332
Beta vulgaris (sugarbeet)  ( Select Species     Clear Species)
  bvul23109 TC15771
Brassica napus (rapeseed)  ( Select Species     Clear Species)
  bnap15027 Bna.16641
Bruguiera gymnorhiza ()  ( Select Species     Clear Species)
  bgym1273 C_BP9389031
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann19534 CA5193621
Ceratopteris richardii (water sprite)  ( Select Species     Clear Species)
  cric3795 S_BQ0869393
Citrus clementina ()  ( Select Species     Clear Species)
  ccle67 PUT-148a-Citrus_clementina-901
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin11670 Csi.82251
Euphorbia tirucalli ()  ( Select Species     Clear Species)
  etir3753 S_BP9550181
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb5191 3288781
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax82585 Gma.43831
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb1824 C_BQ4141981
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir77406 TC376171
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul49618 Hv.6082
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat49435 Lsa.55331
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc64832 Les.123321
Malus x.domestica (apple)  ( Select Species     Clear Species)
  mdom2876 Mdo.36851
Manihot esculenta (cassava)  ( Select Species     Clear Species)
  mesc4491 C_CK6512771
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru84234 TC1006731
Mimulus guttatus (spotted monkey flower)  ( Select Species     Clear Species)
  mgut1672 MgU41221
Nuphar advena ()  ( Select Species     Clear Species)
  nadv2483 3531372
  nadv2996 3552162
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat147495 Os07g254202
  osat170508 4718.m00143 Protein sequence may be in error2
Panicum virgatum (switchgrass)  ( Select Species     Clear Species)
  pvir3393 S_DN1432172
Persea americana (avocado)  ( Select Species     Clear Species)
  pame2999 2102032
Petunia x.hybrida (petunia)  ( Select Species     Clear Species)
  phyb241 C_CV2934311
Phaseolus coccineus ()  ( Select Species     Clear Species)
  pcoc11904 C_CA8981811
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul7278 PUT-148a-Phaseolus_vulgaris-93251
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat24622 Ppa.15403
  ppat27832 Ppa.58193
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla17339 TC8673
Pinus pinaster (maritime pine)  ( Select Species     Clear Species)
  ppis3777 C_BX6825873
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae45508 CV0362336
  ptae65630 TC748193
Poncirus trifoliata ()  ( Select Species     Clear Species)
  ptri398 C_CD5760841
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb13248 Contig8561
  palb3511 C_CX6576951
  palb6767 C_CX6592381
Populus balsamifera (balsam poplar)  ( Select Species     Clear Species)
  pbal144 Pba.1661
Populus deltoides ()  ( Select Species     Clear Species)
  pdel4771 C_CK3179301
Populus euphratica ()  ( Select Species     Clear Species)
  peup1864 S_AJ7792061
Populus euramericana ()  ( Select Species     Clear Species)
  peur862 S_CX1815011
Prunus persica (peach)  ( Select Species     Clear Species)
  pers11034 C_BU0408631
Saccharum officinarum (sugar cane)  ( Select Species     Clear Species)
  soff2585 Sof.32752
Saruma henryi ()  ( Select Species     Clear Species)
  shen2299 3094522
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub44858 Stu.58241
Sorghum bicolor (sorghum)  ( Select Species     Clear Species)
  sorg42142 Sbi.36002
Stevia rebaudiana (stevia)  ( Select Species     Clear Species)
  sreb5792 S_BG5251861
Triphysaria versicolor ()  ( Select Species     Clear Species)
  tver572 C_BE5748131
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes125072 Ta.25552
  taes140842 Ta.378334
Triticum monococcum (einkorn wheat)  ( Select Species     Clear Species)
  tmon4657 PUT-148a-Triticum_monococcum-468412
Triticum turgidum (poulard wheat)  ( Select Species     Clear Species)
  ttur1777 S_AJ610733.8k2
Vaccinium corymbosum (American blueberry)  ( Select Species     Clear Species)
  vcor43 2956751
Vitis shuttleworthii (calloose grape)  ( Select Species     Clear Species)
  vshu873 C_CV0941841
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin25962 Vvi.34931
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir435 3471433
Zantedeschia aethiopica (calla-lilly)  ( Select Species     Clear Species)
  zaet97 S_AJ7033442
Zea mays (corn)  ( Select Species     Clear Species)
  zmay63293 Zm.66662
Subfamily
1  2  3  4  5  6  

Subfamily ID: 1

SEQUENCE: amaj2927 LENGTH: 267 aa
IPR005062
SAC3/GANP
PF03399 [60-209]T 3.7e-34 PF03399 SAC3_GANP SAC3_GANP
IPR006746
26S proteasome non-ATPase regulatory subunit Nin1/mts3
PTHR12387 [1-267]T 7.1e-120 PTHR12387 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8
no IPR
SSF56399 [173-235]T 0.014 SSF56399 ADP-ribosylation ADP-ribosylation

Subfamily ID: 2

SEQUENCE: acom95 LENGTH: 267 aa
IPR005062
SAC3/GANP
PF03399 [60-209]T 3.4e-32 PF03399 SAC3_GANP SAC3_GANP
IPR006746
26S proteasome non-ATPase regulatory subunit Nin1/mts3
PTHR12387 [1-267]T 4.5e-119 PTHR12387 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8
no IPR
SSF56399 [173-237]T 0.0091 SSF56399 ADP-ribosylation ADP-ribosylation

Subfamily ID: 3

SEQUENCE: atri6188 LENGTH: 218 aa
IPR005062
SAC3/GANP
PF03399 [24-209]T 3.6e-34 PF03399 SAC3_GANP SAC3_GANP
IPR006746
26S proteasome non-ATPase regulatory subunit Nin1/mts3
PTHR12387 [1-218]T 4.7e-89 PTHR12387 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8

Subfamily ID: 4

SEQUENCE: taes140842 LENGTH: 213 aa
IPR005062
SAC3/GANP
PF03399 [11-156]T 3.7e-15 PF03399 SAC3_GANP SAC3_GANP
IPR006746
26S proteasome non-ATPase regulatory subunit Nin1/mts3
PTHR12387 [15-213]T 2.3e-68 PTHR12387 26S PROTEASOME REGULATORY SUBUNIT 26S PROTEASOME REGULATORY SUBUNIT

Subfamily ID: 5

SEQUENCE: aame291 LENGTH: 185 aa
IPR005062
SAC3/GANP
PF03399 [24-185]T 1.3e-26 PF03399 SAC3_GANP SAC3_GANP
IPR006746
26S proteasome non-ATPase regulatory subunit Nin1/mts3
PTHR12387 [1-185]T 4.4e-73 PTHR12387 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8

Subfamily ID: 6

SEQUENCE: ptae45508 LENGTH: 214 aa
IPR005062
SAC3/GANP
PF03399 [2-158]T 1.2e-37 PF03399 SAC3_GANP SAC3_GANP
IPR006746
26S proteasome non-ATPase regulatory subunit Nin1/mts3
PTHR12387 [1-214]T 6e-81 PTHR12387 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8
Subfamily
1  2  3  4  5  6  

Sub family ID: 0
IPR006746: 26S proteasome non-ATPase regulatory subunit Nin1/mts3
Biological ProcessGO:0006508, proteolysis and peptidolysis
Cellular ComponentGO:0005838, proteasome regulatory particle (sensu Eukarya)
 
Sub family ID: 1
IPR006746: 26S proteasome non-ATPase regulatory subunit Nin1/mts3
Biological ProcessGO:0006508, proteolysis and peptidolysis
Cellular ComponentGO:0005838, proteasome regulatory particle (sensu Eukarya)
 
Sub family ID: 2
IPR006746: 26S proteasome non-ATPase regulatory subunit Nin1/mts3
Biological ProcessGO:0006508, proteolysis and peptidolysis
Cellular ComponentGO:0005838, proteasome regulatory particle (sensu Eukarya)
 
Sub family ID: 3
IPR006746: 26S proteasome non-ATPase regulatory subunit Nin1/mts3
Biological ProcessGO:0006508, proteolysis and peptidolysis
Cellular ComponentGO:0005838, proteasome regulatory particle (sensu Eukarya)
 
Sub family ID: 4
IPR006746: 26S proteasome non-ATPase regulatory subunit Nin1/mts3
Biological ProcessGO:0006508, proteolysis and peptidolysis
Cellular ComponentGO:0005838, proteasome regulatory particle (sensu Eukarya)
 
Sub family ID: 5
IPR006746: 26S proteasome non-ATPase regulatory subunit Nin1/mts3
Biological ProcessGO:0006508, proteolysis and peptidolysis
Cellular ComponentGO:0005838, proteasome regulatory particle (sensu Eukarya)
 
Sub family ID: 6
IPR006746: 26S proteasome non-ATPase regulatory subunit Nin1/mts3
Biological ProcessGO:0006508, proteolysis and peptidolysis
Cellular ComponentGO:0005838, proteasome regulatory particle (sensu Eukarya)
 
Department of Biology | University of North Carolina at Chapel Hill
Comments / Questions