Search results for family: 20095, total 4 Unipeptides retrieved.


Related families 4 families found.
Excluded Unipeptides View
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

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Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
gmax74339 Gma.14338Glycine max (soybean) 
lcor8738 Lco.798Lotus corniculatus (lotus) 
ptrc11874  interProPUT-148a-Populus_trichocarpa_X_Populus_deltoides-5555Populus trichocarpa (western balsam poplar) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
fana435  interProC_CO380975Fragaria x.ananassa (strawberry) 
Species
Fragaria x.ananassa  Glycine max  Lotus corniculatus  Populus trichocarpa  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Fragaria x.ananassa (strawberry)  ( Select Species     Clear Species)
  fana435 C_CO3809752
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax74339 Gma.143381
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor8738 Lco.7981
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc11874 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-55551
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: ptrc11874 LENGTH: 108 aa
IPR006044
11-S plant seed storage protein
PR00439 [12-28]T 7.1e-09 PR00439 11SGLOBULIN[30-45]T 7.1e-09 PR00439 11SGLOBULIN[48-66]T 7.1e-09 PR00439 11SGLOBULIN 11SGLOBULIN
IPR006045
Cupin 1
PF00190 [1-93]T 3.1e-10 PF00190 Cupin_1 Cupin_1
IPR011051
Cupin, RmlC-type
SSF51182 [1-108]T 9e-17 SSF51182 RmlC-like cupins RmlC-like cupins

Subfamily ID: 2

SEQUENCE: fana435 LENGTH: 105 aa
IPR006044
11-S plant seed storage protein
PR00439 [19-35]T 6.9e-08 PR00439 11SGLOBULIN[37-52]T 6.9e-08 PR00439 11SGLOBULIN[55-73]T 6.9e-08 PR00439 11SGLOBULIN[76-93]T 6.9e-08 PR00439 11SGLOBULIN 11SGLOBULIN
IPR006045
Cupin 1
PF00190 [8-99]T 4.4e-05 PF00190 Cupin_1 Cupin_1
IPR011051
Cupin, RmlC-type
SSF51182 [8-96]T 1.3e-09 SSF51182 RmlC-like cupins RmlC-like cupins
Subfamily
1  2  

Sub family ID: 1
IPR006044: 11-S plant seed storage protein
Molecular FunctionGO:0045735, nutrient reservoir activity
IPR006045: Cupin
Molecular FunctionGO:0045735, nutrient reservoir activity
 
Sub family ID: 2
IPR006044: 11-S plant seed storage protein
Molecular FunctionGO:0045735, nutrient reservoir activity
IPR006045: Cupin
Molecular FunctionGO:0045735, nutrient reservoir activity
 
Department of Biology | University of North Carolina at Chapel Hill
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