Search results for family: 20103, total 4 Unipeptides retrieved.


Related families 1 families found.
Excluded Unipeptides View
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
garb10195  interProS_BM358473Gossypium arboreum (tree cotton) 
ghir64102 BM358473Gossypium hirsutum (cotton (tetraploid)) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
garb9645  interProC_BQ404357Gossypium arboreum (tree cotton) 
ghir72244 TC38315Gossypium hirsutum (cotton (tetraploid)) 
Species
Gossypium arboreum  Gossypium hirsutum  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb10195 S_BM3584731
  garb9645 C_BQ4043572
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir64102 BM3584731
  ghir72244 TC383152
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: garb10195 LENGTH: 80 aa
IPR009438
Phytosulfokine
PF06404 [7-80]T 3.8e-07 PF06404 PSK PSK
no IPR
DOMAIN [1-2]T DOMAIN DOMAIN N-REGION.[3-14]T DOMAIN DOMAIN H-REGION.[15-19]T DOMAIN DOMAIN C-REGION. DOMAIN C-REGION.
SIGNAL [1-19]T SIGNAL SIGNAL SIGNAL

Subfamily ID: 2

SEQUENCE: garb9645 LENGTH: 84 aa
IPR009438
Phytosulfokine
PF06404 [11-84]T 3.6000000000000003E-22 PF06404 PSK PSK
no IPR
DOMAIN [1-3]T DOMAIN DOMAIN N-REGION.[4-15]T DOMAIN DOMAIN H-REGION.[16-23]T DOMAIN DOMAIN C-REGION. DOMAIN C-REGION.
SIGNAL [1-23]T SIGNAL SIGNAL SIGNAL
Subfamily
1  2  

Sub family ID: 1
IPR009438: Phytosulfokine
Biological ProcessGO:0008283, cell proliferation
Cellular ComponentGO:0005576, extracellular
Molecular FunctionGO:0008083, growth factor activity
 
Sub family ID: 2
IPR009438: Phytosulfokine
Biological ProcessGO:0008283, cell proliferation
Cellular ComponentGO:0005576, extracellular
Molecular FunctionGO:0008083, growth factor activity
 
Department of Biology | University of North Carolina at Chapel Hill
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