Search results for family: 21769, total 4 Unipeptides retrieved.


Related families 5 families found.
Excluded Unipeptides View
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
pdel2241  interProS_CK320834Populus deltoides () 
peup3977 S_AJ780663Populus euphratica () 
pnig1866 S_BP936220Populus nigra (black poplar) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
vvin34886  interProVvi.8232Vitis vinifera (wine grape) 
Species
Populus deltoides  Populus euphratica  Populus nigra  Vitis vinifera  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Populus deltoides ()  ( Select Species     Clear Species)
  pdel2241 S_CK3208341
Populus euphratica ()  ( Select Species     Clear Species)
  peup3977 S_AJ7806631
Populus nigra (black poplar)  ( Select Species     Clear Species)
  pnig1866 S_BP9362201
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin34886 Vvi.82322
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: pdel2241 LENGTH: 86 aa
IPR008985
Concanavalin A-like lectin/glucanase
SSF49899 [5-86]T 7.1e-12 SSF49899 Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases
IPR010713
Xyloglucan endo-transglycosylase, C-terminal
PF06955 [33-86]T 1.6e-25 PF06955 XET_C XET_C

Subfamily ID: 2

SEQUENCE: vvin34886 LENGTH: 51 aa
IPR008985
Concanavalin A-like lectin/glucanase
SSF49899 [5-51]T 2.9e-09 SSF49899 Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases
IPR010713
Xyloglucan endo-transglycosylase, C-terminal
PF06955 [2-50]T 1.1e-26 PF06955 XET_C XET_C
Subfamily
1  2  

Sub family ID: 1
IPR010713: Xyloglucan endo-transglycosylase, C-terminal
Biological ProcessGO:0006073, glucan metabolism
Cellular ComponentGO:0005618, cell wall
GO:0048046, apoplast
Molecular FunctionGO:0016762, xyloglucan:xyloglucosyl transferase activity
 
Sub family ID: 2
IPR010713: Xyloglucan endo-transglycosylase, C-terminal
Biological ProcessGO:0006073, glucan metabolism
Cellular ComponentGO:0005618, cell wall
GO:0048046, apoplast
Molecular FunctionGO:0016762, xyloglucan:xyloglucosyl transferase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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