Search results for family: 2449, total 32 Unipeptides retrieved.


Related families 1 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

View results sorted by

Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
aame4547  interPro284726Acorus americanus (sweetflag) 
acep17019 TC3055Allium cepa (onion) 
amaj4122 S_AJ808359Antirrhinum majus (snapdragon) 
atha91202 At3g06580Arabidopsis thaliana (thale cress) 
cann18439 TC5520Capsicum annuum (pepper) 
ccle2165 PUT-148a-Citrus_clementina-3201Citrus clementina () 
csin10790 Csi.7314Citrus sinensis (orange) 
ghir55068 TC34401Gossypium hirsutum (cotton (tetraploid)) 
ghir67493 TC33178Gossypium hirsutum (cotton (tetraploid)) 
hvul52062 Hv.3873Hordeum vulgare (barley) 
jreg124 C_CV194917Juglans regia (English walnut) 
lsat51131 Lsa.7280Lactuca sativa (lettuce) 
ltul4251 252835Liriodendron tulipifera () 
lcor12616 Lco.6016Lotus corniculatus (lotus) 
lesc63890 Les.7529Lycopersicon esculentum (tomato) 
mesc1254 S_CK642919Manihot esculenta (cassava) 
mtru89813 TC101045Medicago truncatula (barrel medic) 
nben6703 TC10139Nicotiana benthamiana (wild tobacco) 
nadv535 353469Nuphar advena () 
osat163888 Os03g61710Oryza sativa (rice) 
pvir1825 C_DN152038Panicum virgatum (switchgrass) 
pame4442 209565Persea americana (avocado) 
ppis2588 C_AJ541800Pinus pinaster (maritime pine) 
ptae49622 TC68078Pinus taeda (loblolly pine) 
pzey334 S_CB816838Plumbago zeylanica () 
ptri7042 S_CX637643Poncirus trifoliata () 
taes123817 Ta.1938Triticum aestivum (bread wheat) 
tmon2250 PUT-148a-Triticum_monococcum-3355Triticum monococcum (einkorn wheat) 
vvin25579 Vvi.3036Vitis vinifera (wine grape) 
wmir164 346851Welwitschia mirabilis () 
zmay61270 Zm.3744Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
ptae37803  interProCO159035Pinus taeda (loblolly pine) 
Species
Acorus americanus  Allium cepa  Antirrhinum majus  Arabidopsis thaliana  Capsicum annuum  Citrus clementina  Citrus sinensis  Gossypium hirsutum  Hordeum vulgare  Juglans regia  Lactuca sativa  Liriodendron tulipifera  Lotus corniculatus  Lycopersicon esculentum  Manihot esculenta  Medicago truncatula  Nicotiana benthamiana  Nuphar advena  Oryza sativa  Panicum virgatum  Persea americana  Pinus pinaster  Pinus taeda  Plumbago zeylanica  Poncirus trifoliata  Triticum aestivum  Triticum monococcum  Vitis vinifera  Welwitschia mirabilis  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame4547 2847261
Allium cepa (onion)  ( Select Species     Clear Species)
  acep17019 TC30551
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj4122 S_AJ8083591
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha91202 At3g065801
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann18439 TC55201
Citrus clementina ()  ( Select Species     Clear Species)
  ccle2165 PUT-148a-Citrus_clementina-32011
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin10790 Csi.73141
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir55068 TC344011
  ghir67493 TC331781
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul52062 Hv.38731
Juglans regia (English walnut)  ( Select Species     Clear Species)
  jreg124 C_CV1949171
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat51131 Lsa.72801
Liriodendron tulipifera ()  ( Select Species     Clear Species)
  ltul4251 2528351
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor12616 Lco.60161
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc63890 Les.75291
Manihot esculenta (cassava)  ( Select Species     Clear Species)
  mesc1254 S_CK6429191
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru89813 TC1010451
Nicotiana benthamiana (wild tobacco)  ( Select Species     Clear Species)
  nben6703 TC101391
Nuphar advena ()  ( Select Species     Clear Species)
  nadv535 3534691
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat163888 Os03g617101
Panicum virgatum (switchgrass)  ( Select Species     Clear Species)
  pvir1825 C_DN1520381
Persea americana (avocado)  ( Select Species     Clear Species)
  pame4442 2095651
Pinus pinaster (maritime pine)  ( Select Species     Clear Species)
  ppis2588 C_AJ5418001
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae37803 CO1590352
  ptae49622 TC680781
Plumbago zeylanica ()  ( Select Species     Clear Species)
  pzey334 S_CB8168381
Poncirus trifoliata ()  ( Select Species     Clear Species)
  ptri7042 S_CX6376431
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes123817 Ta.19381
Triticum monococcum (einkorn wheat)  ( Select Species     Clear Species)
  tmon2250 PUT-148a-Triticum_monococcum-33551
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin25579 Vvi.30361
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir164 3468511
Zea mays (corn)  ( Select Species     Clear Species)
  zmay61270 Zm.37441
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: aame4547 LENGTH: 193 aa
IPR000705
Galactokinase
PTHR10457 [15-173]T 1.1e-71 PTHR10457 MEVALONATE KINASE/GALACTOKINASE MEVALONATE KINASE/GALACTOKINASE
IPR006203
GHMP kinase, ATP-binding region
PS00627 [27-38]T 8e-5 PS00627 GHMP_KINASES_ATP GHMP_KINASES_ATP
IPR006204
GHMP kinase
PF00288 [20-87]T 1.1e-18 PF00288 GHMP_kinases_N GHMP_kinases_N
IPR006206
Mevalonate and galactokinase
PR00959 [25-47]T 6.9e-12 PR00959 MEVGALKINASE[67-86]T 6.9e-12 PR00959 MEVGALKINASE MEVGALKINASE
no IPR
PTHR10457:SF7 [15-173]T 1.1e-71 PTHR10457:SF7 GALACTOKINASE 2 GALACTOKINASE 2
SSF54211 [18-124]T 1.5e-22 SSF54211 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Subfamily ID: 2

SEQUENCE: ptae37803 LENGTH: 237 aa
IPR000705
Galactokinase
PR00473 [5-23]T 1e-17 PR00473 GALCTOKINASE[77-88]T 1e-17 PR00473 GALCTOKINASE[105-123]T 1e-17 PR00473 GALCTOKINASE GALCTOKINASE
PS00106 [5-16]T 8e-5 PS00106 GALACTOKINASE GALACTOKINASE
PTHR10457 [68-237]T 5.3e-65 PTHR10457 MEVALONATE KINASE/GALACTOKINASE MEVALONATE KINASE/GALACTOKINASE
IPR006203
GHMP kinase, ATP-binding region
PS00627 [114-125]? NA PS00627 GHMP_KINASES_ATP GHMP_KINASES_ATP
IPR006204
GHMP kinase
PF00288 [107-175]T 3.5e-16 PF00288 GHMP_kinases_N GHMP_kinases_N
IPR006206
Mevalonate and galactokinase
PR00959 [3-27]T 9.1e-26 PR00959 MEVGALKINASE[112-134]T 9.1e-26 PR00959 MEVGALKINASE[155-174]T 9.1e-26 PR00959 MEVGALKINASE MEVGALKINASE
no IPR
PTHR10457:SF7 [68-237]T 5.3e-65 PTHR10457:SF7 GALACTOKINASE 2 GALACTOKINASE 2
SSF54211 [1-186]T 2.7e-28 SSF54211 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
Subfamily
1  2  

Sub family ID: 0
IPR000705: Galactokinase
Biological ProcessGO:0006012, galactose metabolism
GO:0046835, carbohydrate phosphorylation
Molecular FunctionGO:0004335, galactokinase activity
GO:0005524, ATP binding
 
Sub family ID: 1
IPR000705: Galactokinase
Biological ProcessGO:0006012, galactose metabolism
GO:0046835, carbohydrate phosphorylation
Molecular FunctionGO:0004335, galactokinase activity
GO:0005524, ATP binding
IPR006203: GHMP kinase, ATP-binding region
Molecular FunctionGO:0005524, ATP binding
IPR006204: GHMP kinase
Biological ProcessGO:0016310, phosphorylation
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
IPR006206: Mevalonate and galactokinase
Biological ProcessGO:0008152, metabolism
Cellular ComponentGO:0005737, cytoplasm
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
GO:0016773, phosphotransferase activity, alcohol group as acceptor
 
Sub family ID: 2
IPR000705: Galactokinase
Biological ProcessGO:0006012, galactose metabolism
GO:0046835, carbohydrate phosphorylation
Molecular FunctionGO:0004335, galactokinase activity
GO:0005524, ATP binding
IPR006203: GHMP kinase, ATP-binding region
Molecular FunctionGO:0005524, ATP binding
IPR006204: GHMP kinase
Biological ProcessGO:0016310, phosphorylation
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
IPR006206: Mevalonate and galactokinase
Biological ProcessGO:0008152, metabolism
Cellular ComponentGO:0005737, cytoplasm
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
GO:0016773, phosphotransferase activity, alcohol group as acceptor
 
Department of Biology | University of North Carolina at Chapel Hill
Comments / Questions