Search results for family: 2510, total 54 Unipeptides retrieved.


Related families 2 families found.
Excluded Unipeptides View
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  3  4  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
acep18481  interProTC2877Allium cepa (onion) 
amaj4859 S_AJ802067Antirrhinum majus (snapdragon) 
atha98611 At2g43360Arabidopsis thaliana (thale cress) 
cann10860 CA525025Capsicum annuum (pepper) 
ccle3906 PUT-148a-Citrus_clementina-5751Citrus clementina () 
ccle4761 PUT-148a-Citrus_clementina-6987Citrus clementina () 
ccle56 PUT-148a-Citrus_clementina-75Citrus clementina () 
csin9440 Csi.5694Citrus sinensis (orange) 
ecal9364 40149Eschscholzia californica (california poppy) 
ecal9870 38217Eschscholzia californica (california poppy) 
gmax83083 Gma.12574Glycine max (soybean) 
gsoj491 PUT-148a-Glycine_soja-760Glycine soja (wild soybean) 
garb4540 S_BQ411127Gossypium arboreum (tree cotton) 
garb5097 C_BE055844Gossypium arboreum (tree cotton) 
ghir50100 BQ411126Gossypium hirsutum (cotton (tetraploid)) 
ghir55003 TC33078Gossypium hirsutum (cotton (tetraploid)) 
grai2151 Gra.2217Gossypium raimondii () 
ltul2027 249773Liriodendron tulipifera () 
lcor10767 Lco.3680Lotus corniculatus (lotus) 
lcor10795 Lco.3720Lotus corniculatus (lotus) 
lesc70970 Les.8400Lycopersicon esculentum (tomato) 
mtru80008 TC95095Medicago truncatula (barrel medic) 
mxpi169 S_AW255314Mentha x.piperita (peppermint) 
mcry19122 BE035670Mesembryanthemum crystallinum (iceplant) 
nrus5540 BP527121Nicotiana tabacum (common tobacco) 
osat136911 Os08g42730Oryza sativa (rice) 
osat138759 7330.m00084 Protein sequence may be in errorOryza sativa (rice) 
pvul3326 PUT-148a-Phaseolus_vulgaris-4324Phaseolus vulgaris (common bean) 
ppat25410 Ppa.2673Physcomitrella patens () 
pgla14188 TC9609Picea glauca (white spruce) 
pgla2607 CO213425Picea glauca (white spruce) 
ptae45165 TC61064Pinus taeda (loblolly pine) 
ptae48533 DR018167Pinus taeda (loblolly pine) 
parm2088 S_CV052164Prunus armeniaca (apricot) 
parm2518 S_CV050514Prunus armeniaca (apricot) 
pdul660 S_BU573263Prunus dulcis (almond) 
pmen1727 S_CN636337Pseudotsuga menziesii (Douglas-fir) 
soff2060 Sof.2588Saccharum officinarum (sugar cane) 
shen2307 309462Saruma henryi () 
scer9533 CD453338Secale cereale (rye) 
sind625 S_BU669595Sesamum indicum (sesame) 
stub44443 Stu.8539Solanum tuberosum (potato) 
stub46236 Stu.13693Solanum tuberosum (potato) 
shal313 S_BQ656030Sorghum halepense (Johnson grass) 
taes129357 Ta.23173Triticum aestivum (bread wheat) 
tmon2460 PUT-148a-Triticum_monococcum-3651Triticum monococcum (einkorn wheat) 
ttur1085 S_BE428792.8kTriticum turgidum (poulard wheat) 
vshu352 S_CV096702Vitis shuttleworthii (calloose grape) 
zmay60297 Zm.18363Zea mays (corn) 
zmay64080 Zm.24932Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
garb4994  interProC_BQ411126Gossypium arboreum (tree cotton) 
msat2078 S_CO516192Medicago sativa (alfalfa) 
Subfamily ID: 3( Select Subfamily     Clear Subfamily)
aame459  interPro279998Acorus americanus (sweetflag) 
Subfamily ID: 4( Select Subfamily     Clear Subfamily)
crum4568  interProC_CB088629Cycas rumphii () 
Species
Acorus americanus  Allium cepa  Antirrhinum majus  Arabidopsis thaliana  Capsicum annuum  Citrus clementina  Citrus sinensis  Cycas rumphii  Eschscholzia californica  Glycine max  Glycine soja  Gossypium arboreum  Gossypium hirsutum  Gossypium raimondii  Liriodendron tulipifera  Lotus corniculatus  Lycopersicon esculentum  Medicago sativa  Medicago truncatula  Mentha x.piperita  Mesembryanthemum crystallinum  Nicotiana tabacum  Oryza sativa  Phaseolus vulgaris  Physcomitrella patens  Picea glauca  Pinus taeda  Prunus armeniaca  Prunus dulcis  Pseudotsuga menziesii  Saccharum officinarum  Saruma henryi  Secale cereale  Sesamum indicum  Solanum tuberosum  Sorghum halepense  Triticum aestivum  Triticum monococcum  Triticum turgidum  Vitis shuttleworthii  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame459 2799983
Allium cepa (onion)  ( Select Species     Clear Species)
  acep18481 TC28771
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj4859 S_AJ8020671
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha98611 At2g433601
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann10860 CA5250251
Citrus clementina ()  ( Select Species     Clear Species)
  ccle3906 PUT-148a-Citrus_clementina-57511
  ccle4761 PUT-148a-Citrus_clementina-69871
  ccle56 PUT-148a-Citrus_clementina-751
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin9440 Csi.56941
Cycas rumphii ()  ( Select Species     Clear Species)
  crum4568 C_CB0886294
Eschscholzia californica (california poppy)  ( Select Species     Clear Species)
  ecal9364 401491
  ecal9870 382171
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax83083 Gma.125741
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj491 PUT-148a-Glycine_soja-7601
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb4540 S_BQ4111271
  garb4994 C_BQ4111262
  garb5097 C_BE0558441
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir50100 BQ4111261
  ghir55003 TC330781
Gossypium raimondii ()  ( Select Species     Clear Species)
  grai2151 Gra.22171
Liriodendron tulipifera ()  ( Select Species     Clear Species)
  ltul2027 2497731
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor10767 Lco.36801
  lcor10795 Lco.37201
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc70970 Les.84001
Medicago sativa (alfalfa)  ( Select Species     Clear Species)
  msat2078 S_CO5161922
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru80008 TC950951
Mentha x.piperita (peppermint)  ( Select Species     Clear Species)
  mxpi169 S_AW2553141
Mesembryanthemum crystallinum (iceplant)  ( Select Species     Clear Species)
  mcry19122 BE0356701
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus5540 BP5271211
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat136911 Os08g427301
  osat138759 7330.m00084 Protein sequence may be in error1
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul3326 PUT-148a-Phaseolus_vulgaris-43241
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat25410 Ppa.26731
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla14188 TC96091
  pgla2607 CO2134251
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae45165 TC610641
  ptae48533 DR0181671
Prunus armeniaca (apricot)  ( Select Species     Clear Species)
  parm2088 S_CV0521641
  parm2518 S_CV0505141
Prunus dulcis (almond)  ( Select Species     Clear Species)
  pdul660 S_BU5732631
Pseudotsuga menziesii (Douglas-fir)  ( Select Species     Clear Species)
  pmen1727 S_CN6363371
Saccharum officinarum (sugar cane)  ( Select Species     Clear Species)
  soff2060 Sof.25881
Saruma henryi ()  ( Select Species     Clear Species)
  shen2307 3094621
Secale cereale (rye)  ( Select Species     Clear Species)
  scer9533 CD4533381
Sesamum indicum (sesame)  ( Select Species     Clear Species)
  sind625 S_BU6695951
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub44443 Stu.85391
  stub46236 Stu.136931
Sorghum halepense (Johnson grass)  ( Select Species     Clear Species)
  shal313 S_BQ6560301
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes129357 Ta.231731
Triticum monococcum (einkorn wheat)  ( Select Species     Clear Species)
  tmon2460 PUT-148a-Triticum_monococcum-36511
Triticum turgidum (poulard wheat)  ( Select Species     Clear Species)
  ttur1085 S_BE428792.8k1
Vitis shuttleworthii (calloose grape)  ( Select Species     Clear Species)
  vshu352 S_CV0967021
Zea mays (corn)  ( Select Species     Clear Species)
  zmay60297 Zm.183631
  zmay64080 Zm.249321
Subfamily
1  2  3  4  

Subfamily ID: 1

SEQUENCE: acep18481 LENGTH: 314 aa
IPR002684
Biotin synthase
PIRSF001619 [11-314]T 1.2e-195 PIRSF001619 Biotin synthetase Biotin synthetase
TIGR00433 [29-314]T 6e-149 TIGR00433 bioB: biotin synthase bioB: biotin synthase
IPR006638
Elongator protein 3/MiaB/NifB
SM00729 [57-265]T 1.5e-43 SM00729 no description no description
IPR007197
Radical SAM
PF04055 [61-225]T 2.9e-23 PF04055 Radical_SAM Radical_SAM
IPR010722
Biotin and thiamin synthesis associated
PF06968 [236-314]T 3.4e-34 PF06968 BATS BATS
no IPR
PTHR22976 [1-313]T 5.9e-157 PTHR22976 BIOTIN SYNTHASE BIOTIN SYNTHASE
PTHR22976:SF1 [1-313]T 5.9e-157 PTHR22976:SF1 BIOTIN SYNTHASE BIOTIN SYNTHASE
SSF52335 [106-251]T 9.2e-11 SSF52335 Methylglyoxal synthase-like Methylglyoxal synthase-like

Subfamily ID: 2

SEQUENCE: garb4994 LENGTH: 243 aa
IPR006638
Elongator protein 3/MiaB/NifB
SM00729 [83-243]T 0.0018 SM00729 no description no description
IPR007197
Radical SAM
PF04055 [87-243]T 5.1e-11 PF04055 Radical_SAM Radical_SAM
no IPR
PTHR22976 [1-42]T 3e-82 PTHR22976 BIOTIN SYNTHASE[68-242]T 3e-82 PTHR22976 BIOTIN SYNTHASE BIOTIN SYNTHASE
PTHR22976:SF1 [1-42]T 3e-82 PTHR22976:SF1 BIOTIN SYNTHASE[68-242]T 3e-82 PTHR22976:SF1 BIOTIN SYNTHASE BIOTIN SYNTHASE
SSF52335 [132-223]T 0.0053 SSF52335 Methylglyoxal synthase-like Methylglyoxal synthase-like

Subfamily ID: 3

SEQUENCE: aame459 LENGTH: 286 aa
IPR002684
Biotin synthase
PIRSF001619 [44-286]T 4.1e-121 PIRSF001619 Biotin synthetase Biotin synthetase
IPR006638
Elongator protein 3/MiaB/NifB
SM00729 [90-285]T 3.4e-32 SM00729 no description no description
IPR007197
Radical SAM
PF04055 [94-258]T 8.2e-21 PF04055 Radical_SAM Radical_SAM
no IPR
DOMAIN [1-12]T DOMAIN DOMAIN N-REGION.[13-25]T DOMAIN DOMAIN H-REGION.[26-37]T DOMAIN DOMAIN C-REGION. DOMAIN C-REGION.
PTHR22976 [15-286]T 1.2e-125 PTHR22976 BIOTIN SYNTHASE BIOTIN SYNTHASE
PTHR22976:SF1 [15-286]T 1.2e-125 PTHR22976:SF1 BIOTIN SYNTHASE BIOTIN SYNTHASE
SIGNAL [1-37]T SIGNAL SIGNAL SIGNAL
SSF52335 [139-272]T 1.3e-09 SSF52335 Methylglyoxal synthase-like Methylglyoxal synthase-like

Subfamily ID: 4

SEQUENCE: crum4568 LENGTH: 215 aa
IPR002684
Biotin synthase
TIGR00433 [9-215]T 1.7e-99 TIGR00433 bioB: biotin synthase bioB: biotin synthase
IPR006638
Elongator protein 3/MiaB/NifB
SM00729 [37-215]T 9.7e-17 SM00729 no description no description
IPR007197
Radical SAM
PF04055 [41-203]T 1e-23 PF04055 Radical_SAM Radical_SAM
no IPR
PTHR22976 [1-215]T 9.4e-103 PTHR22976 BIOTIN SYNTHASE BIOTIN SYNTHASE
PTHR22976:SF1 [1-215]T 9.4e-103 PTHR22976:SF1 BIOTIN SYNTHASE BIOTIN SYNTHASE
SSF52335 [86-215]T 3.2e-11 SSF52335 Methylglyoxal synthase-like Methylglyoxal synthase-like
Subfamily
1  2  3  4  

Sub family ID: 1
IPR002684: Biotin synthase
Biological ProcessGO:0009102, biotin biosynthesis
Molecular FunctionGO:0004076, biotin synthase activity
IPR007197: Radical SAM
Molecular FunctionGO:0003824, catalytic activity
GO:0005506, iron ion binding
IPR010722: Biotin and thiamin synthesis associated
Biological ProcessGO:0009102, biotin biosynthesis
Molecular FunctionGO:0004076, biotin synthase activity
GO:0005506, iron ion binding
 
Sub family ID: 2
IPR007197: Radical SAM
Molecular FunctionGO:0003824, catalytic activity
GO:0005506, iron ion binding
 
Sub family ID: 3
IPR002684: Biotin synthase
Biological ProcessGO:0009102, biotin biosynthesis
Molecular FunctionGO:0004076, biotin synthase activity
IPR007197: Radical SAM
Molecular FunctionGO:0003824, catalytic activity
GO:0005506, iron ion binding
 
Sub family ID: 4
IPR002684: Biotin synthase
Biological ProcessGO:0009102, biotin biosynthesis
Molecular FunctionGO:0004076, biotin synthase activity
IPR007197: Radical SAM
Molecular FunctionGO:0003824, catalytic activity
GO:0005506, iron ion binding
 
Department of Biology | University of North Carolina at Chapel Hill
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