Search results for family: 2812, total 50 Unipeptides retrieved.


Related families 5 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
acep19911  interProTC3780Allium cepa (onion) 
atha103559 At5g55200Arabidopsis thaliana (thale cress) 
atha93385 At4g26780Arabidopsis thaliana (thale cress) 
brap3231 C_CV432563Brassica rapa (field mustard) 
brap8964 C_CV432563.11kBrassica rapa (field mustard) 
cjap6142 S_BP176191Cryptomeria japonica (Japanese cedar) 
ghyb6427 330555Gerbera hybrid.cultivar () 
gmax74136 Gma.3177Glycine max (soybean) 
gmax83508 Gma.12548Glycine max (soybean) 
ghir46591 TC39893Gossypium hirsutum (cotton (tetraploid)) 
ghir64040 CO107595Gossypium hirsutum (cotton (tetraploid)) 
hvul55393 Hv.12168Hordeum vulgare (barley) 
lsat48346 Lsa.4414Lactuca sativa (lettuce) 
lesc66428 Les.5742Lycopersicon esculentum (tomato) 
lesc71008 Les.9000Lycopersicon esculentum (tomato) 
mtru95317 TC110847Medicago truncatula (barrel medic) 
nrus4557 TC3615Nicotiana tabacum (common tobacco) 
nrus7406 TC3578Nicotiana tabacum (common tobacco) 
osat141750 Os09g11250Oryza sativa (rice) 
osat178909 Os08g25090Oryza sativa (rice) 
pvir4073 C_DN143333Panicum virgatum (switchgrass) 
pcoc8913 C_CA906155Phaseolus coccineus () 
pcoc9743 S_CA906156Phaseolus coccineus () 
ppat24022 Ppa.765Physcomitrella patens () 
pgla2324 TC5123Picea glauca (white spruce) 
psit575 C_CO219747Picea sitchensis (Sitka spruce) 
ppis3587 S_BX784156Pinus pinaster (maritime pine) 
ptae40711 TC59640Pinus taeda (loblolly pine) 
ptae43334 TC59639Pinus taeda (loblolly pine) 
palb11885 C_CX656305.7kPopulus alba (white poplar) 
palb4286 C_CX656305Populus alba (white poplar) 
peup1020 S_AJ776209Populus euphratica () 
pnig3706 S_BP935182Populus nigra (black poplar) 
ptrc13690 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-9997Populus trichocarpa (western balsam poplar) 
ptrc4177 PUT-148a-Populus_trichocarpa-14811Populus trichocarpa (western balsam poplar) 
pdul377 S_BU645449Prunus dulcis (almond) 
pmen1065 S_CN641130Pseudotsuga menziesii (Douglas-fir) 
scer6091 BQ160056Secale cereale (rye) 
stub33296 Stu.13252Solanum tuberosum (potato) 
stub39076 Stu.6126Solanum tuberosum (potato) 
stub42530 Stu.6826Solanum tuberosum (potato) 
sorg41378 Sbi.2657Sorghum bicolor (sorghum) 
sorg44182 Sbi.6041Sorghum bicolor (sorghum) 
taes124950 Ta.2847Triticum aestivum (bread wheat) 
zmay58955 Zm.6477Zea mays (corn) 
zmay75976 Zm.3646Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
cric4540 S_BE642148Ceratopteris richardii (water sprite) 
cric4610 C_BQ086970Ceratopteris richardii (water sprite) 
crei2408  interProCre.3998Chlamydomonas reinhardtii () 
ppat25770 Ppa.3195Physcomitrella patens () 
Species
Allium cepa  Arabidopsis thaliana  Brassica rapa  Ceratopteris richardii  Chlamydomonas reinhardtii  Cryptomeria japonica  Gerbera hybrid.cultivar  Glycine max  Gossypium hirsutum  Hordeum vulgare  Lactuca sativa  Lycopersicon esculentum  Medicago truncatula  Nicotiana tabacum  Oryza sativa  Panicum virgatum  Phaseolus coccineus  Physcomitrella patens  Picea glauca  Picea sitchensis  Pinus pinaster  Pinus taeda  Populus alba  Populus euphratica  Populus nigra  Populus trichocarpa  Prunus dulcis  Pseudotsuga menziesii  Secale cereale  Solanum tuberosum  Sorghum bicolor  Triticum aestivum  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Allium cepa (onion)  ( Select Species     Clear Species)
  acep19911 TC37801
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha103559 At5g552001
  atha93385 At4g267801
Brassica rapa (field mustard)  ( Select Species     Clear Species)
  brap3231 C_CV4325631
  brap8964 C_CV432563.11k1
Ceratopteris richardii (water sprite)  ( Select Species     Clear Species)
  cric4540 S_BE6421482
  cric4610 C_BQ0869702
Chlamydomonas reinhardtii ()  ( Select Species     Clear Species)
  crei2408 Cre.39982
Cryptomeria japonica (Japanese cedar)  ( Select Species     Clear Species)
  cjap6142 S_BP1761911
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb6427 3305551
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax74136 Gma.31771
  gmax83508 Gma.125481
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir46591 TC398931
  ghir64040 CO1075951
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul55393 Hv.121681
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat48346 Lsa.44141
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc66428 Les.57421
  lesc71008 Les.90001
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru95317 TC1108471
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus4557 TC36151
  nrus7406 TC35781
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat141750 Os09g112501
  osat178909 Os08g250901
Panicum virgatum (switchgrass)  ( Select Species     Clear Species)
  pvir4073 C_DN1433331
Phaseolus coccineus ()  ( Select Species     Clear Species)
  pcoc8913 C_CA9061551
  pcoc9743 S_CA9061561
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat24022 Ppa.7651
  ppat25770 Ppa.31952
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla2324 TC51231
Picea sitchensis (Sitka spruce)  ( Select Species     Clear Species)
  psit575 C_CO2197471
Pinus pinaster (maritime pine)  ( Select Species     Clear Species)
  ppis3587 S_BX7841561
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae40711 TC596401
  ptae43334 TC596391
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb11885 C_CX656305.7k1
  palb4286 C_CX6563051
Populus euphratica ()  ( Select Species     Clear Species)
  peup1020 S_AJ7762091
Populus nigra (black poplar)  ( Select Species     Clear Species)
  pnig3706 S_BP9351821
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc13690 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-99971
  ptrc4177 PUT-148a-Populus_trichocarpa-148111
Prunus dulcis (almond)  ( Select Species     Clear Species)
  pdul377 S_BU6454491
Pseudotsuga menziesii (Douglas-fir)  ( Select Species     Clear Species)
  pmen1065 S_CN6411301
Secale cereale (rye)  ( Select Species     Clear Species)
  scer6091 BQ1600561
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub33296 Stu.132521
  stub39076 Stu.61261
  stub42530 Stu.68261
Sorghum bicolor (sorghum)  ( Select Species     Clear Species)
  sorg41378 Sbi.26571
  sorg44182 Sbi.60411
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes124950 Ta.28471
Zea mays (corn)  ( Select Species     Clear Species)
  zmay58955 Zm.64771
  zmay75976 Zm.36461
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: acep19911 LENGTH: 138 aa
IPR000740
GrpE protein
PF01025 [8-134]T 5.3e-06 PF01025 GrpE GrpE
PR00773 [50-66]T 6.6e-06 PR00773 GRPEPROTEIN[78-93]T 6.6e-06 PR00773 GRPEPROTEIN GRPEPROTEIN
no IPR
PTHR21237 [1-138]T 1e-45 PTHR21237 GRPE PROTEIN GRPE PROTEIN
PTHR21237:SF6 [1-138]T 1e-45 PTHR21237:SF6 GRPE PROTEIN, MITOCHONDRIAL GRPE PROTEIN, MITOCHONDRIAL

Subfamily ID: 2

SEQUENCE: crei2408 LENGTH: 160 aa
IPR000740
GrpE protein
PF01025 [29-160]T 5.2e-06 PF01025 GrpE GrpE
PR00773 [67-83]T 2.8e-07 PR00773 GRPEPROTEIN[95-110]T 2.8e-07 PR00773 GRPEPROTEIN GRPEPROTEIN
no IPR
PTHR21237 [21-160]T 9e-31 PTHR21237 GRPE PROTEIN GRPE PROTEIN
PTHR21237:SF6 [21-160]T 9e-31 PTHR21237:SF6 GRPE PROTEIN, MITOCHONDRIAL GRPE PROTEIN, MITOCHONDRIAL
Subfamily
1  2  

Sub family ID: 1
IPR000740: GrpE protein
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0000774, adenyl-nucleotide exchange factor activity
GO:0003754, chaperone activity
GO:0042803, protein homodimerization activity
 
Sub family ID: 2
IPR000740: GrpE protein
Biological ProcessGO:0006457, protein folding
Molecular FunctionGO:0000774, adenyl-nucleotide exchange factor activity
GO:0003754, chaperone activity
GO:0042803, protein homodimerization activity
 
Department of Biology | University of North Carolina at Chapel Hill
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