Search results for family: 2882, total 25 Unipeptides retrieved.


Related families 2 families found.
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
acep13374  interProCF443207Allium cepa (onion) 
atha90343 At5g27450Arabidopsis thaliana (thale cress) 
etir2623 S_BP962423Euphorbia tirucalli () 
lesc63588 Les.12888Lycopersicon esculentum (tomato) 
mdom4294 Mdo.5574Malus x.domestica (apple) 
mtru80410 TC97250Medicago truncatula (barrel medic) 
nsyl1897 S_BP746303Nicotiana sylvestris (wood tobacco) 
nadv1047 353834Nuphar advena () 
osat148409 Os10g18220Oryza sativa (rice) 
pame1409 210036Persea americana (avocado) 
pvul3923 PUT-148a-Phaseolus_vulgaris-5104Phaseolus vulgaris (common bean) 
ptae57405 TC67868Pinus taeda (loblolly pine) 
ptri53 C_CD573935Poncirus trifoliata () 
palb12762 Contig1102Populus alba (white poplar) 
palb6114 S_CF228435Populus alba (white poplar) 
pers5533 S_BU041448Prunus persica (peach) 
stub40037 Stu.483Solanum tuberosum (potato) 
taes143891 Ta.36872Triticum aestivum (bread wheat) 
vvin33682 Vvi.14390Vitis vinifera (wine grape) 
yfil7 274023Yucca filamentosa (spoon-leaf yucca) 
zele17863 PUT-148a-Zinnia_elegans-7915751Zinnia elegans (zinnia) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
garb7923  interProS_BG441704Gossypium arboreum (tree cotton) 
ghir62559 CO130761Gossypium hirsutum (cotton (tetraploid)) 
ghir75149 TC33788Gossypium hirsutum (cotton (tetraploid)) 
grai1178 Gra.1210Gossypium raimondii () 
Species
Allium cepa  Arabidopsis thaliana  Euphorbia tirucalli  Gossypium arboreum  Gossypium hirsutum  Gossypium raimondii  Lycopersicon esculentum  Malus x.domestica  Medicago truncatula  Nicotiana sylvestris  Nuphar advena  Oryza sativa  Persea americana  Phaseolus vulgaris  Pinus taeda  Poncirus trifoliata  Populus alba  Prunus persica  Solanum tuberosum  Triticum aestivum  Vitis vinifera  Yucca filamentosa  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Allium cepa (onion)  ( Select Species     Clear Species)
  acep13374 CF4432071
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha90343 At5g274501
Euphorbia tirucalli ()  ( Select Species     Clear Species)
  etir2623 S_BP9624231
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb7923 S_BG4417042
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir62559 CO1307612
  ghir75149 TC337882
Gossypium raimondii ()  ( Select Species     Clear Species)
  grai1178 Gra.12102
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc63588 Les.128881
Malus x.domestica (apple)  ( Select Species     Clear Species)
  mdom4294 Mdo.55741
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru80410 TC972501
Nicotiana sylvestris (wood tobacco)  ( Select Species     Clear Species)
  nsyl1897 S_BP7463031
Nuphar advena ()  ( Select Species     Clear Species)
  nadv1047 3538341
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat148409 Os10g182201
Persea americana (avocado)  ( Select Species     Clear Species)
  pame1409 2100361
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul3923 PUT-148a-Phaseolus_vulgaris-51041
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae57405 TC678681
Poncirus trifoliata ()  ( Select Species     Clear Species)
  ptri53 C_CD5739351
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb12762 Contig11021
  palb6114 S_CF2284351
Prunus persica (peach)  ( Select Species     Clear Species)
  pers5533 S_BU0414481
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub40037 Stu.4831
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes143891 Ta.368721
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin33682 Vvi.143901
Yucca filamentosa (spoon-leaf yucca)  ( Select Species     Clear Species)
  yfil7 2740231
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele17863 PUT-148a-Zinnia_elegans-79157511
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: acep13374 LENGTH: 239 aa
IPR000705
Galactokinase
PTHR10457 [18-232]T 2.1e-69 PTHR10457 MEVALONATE KINASE/GALACTOKINASE MEVALONATE KINASE/GALACTOKINASE
IPR006203
GHMP kinase, ATP-binding region
PS00627 [52-63]T 8e-5 PS00627 GHMP_KINASES_ATP GHMP_KINASES_ATP
IPR006204
GHMP kinase
PF00288 [45-127]T 1.4e-12 PF00288 GHMP_kinases_N GHMP_kinases_N
IPR006206
Mevalonate and galactokinase
PR00959 [50-72]T 2.5e-07 PR00959 MEVGALKINASE[107-126]T 2.5e-07 PR00959 MEVGALKINASE MEVGALKINASE
no IPR
PTHR10457:SF4 [18-232]T 2.1e-69 PTHR10457:SF4 MEVALONATE KINASE MEVALONATE KINASE
SSF54211 [5-144]T 1.9e-14 SSF54211 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
SSF55060 [145-232]T 5.3e-11 SSF55060 GHMP Kinase, C-terminal domain GHMP Kinase, C-terminal domain

Subfamily ID: 2

SEQUENCE: garb7923 LENGTH: 169 aa
IPR006206
Mevalonate and galactokinase
PR00959 [7-31]T 3.1e-11 PR00959 MEVGALKINASE[132-154]T 3.1e-11 PR00959 MEVGALKINASE MEVGALKINASE
no IPR
SSF54211 [1-148]T 7.5e-19 SSF54211 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
Subfamily
1  2  

Sub family ID: 0
IPR000705: Galactokinase
Biological ProcessGO:0006012, galactose metabolism
GO:0046835, carbohydrate phosphorylation
Molecular FunctionGO:0004335, galactokinase activity
GO:0005524, ATP binding
IPR006203: GHMP kinase, ATP-binding region
Molecular FunctionGO:0005524, ATP binding
IPR006204: GHMP kinase
Biological ProcessGO:0016310, phosphorylation
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
 
Sub family ID: 1
IPR000705: Galactokinase
Biological ProcessGO:0006012, galactose metabolism
GO:0046835, carbohydrate phosphorylation
Molecular FunctionGO:0004335, galactokinase activity
GO:0005524, ATP binding
IPR006203: GHMP kinase, ATP-binding region
Molecular FunctionGO:0005524, ATP binding
IPR006204: GHMP kinase
Biological ProcessGO:0016310, phosphorylation
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
IPR006206: Mevalonate and galactokinase
Biological ProcessGO:0008152, metabolism
Cellular ComponentGO:0005737, cytoplasm
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
GO:0016773, phosphotransferase activity, alcohol group as acceptor
 
Sub family ID: 2
IPR006206: Mevalonate and galactokinase
Biological ProcessGO:0008152, metabolism
Cellular ComponentGO:0005737, cytoplasm
Molecular FunctionGO:0005524, ATP binding
GO:0016301, kinase activity
GO:0016773, phosphotransferase activity, alcohol group as acceptor
 
Department of Biology | University of North Carolina at Chapel Hill
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