Search results for family: 2928, total 38 Unipeptides retrieved.


Related families 4 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

View results sorted by

Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
atha89153  interProAt3g10230Arabidopsis thaliana (thale cress) 
cann13121 NP916392Capsicum annuum (pepper) 
cann14690 TC3427Capsicum annuum (pepper) 
ccle4975 PUT-148a-Citrus_clementina-7302Citrus clementina () 
csin8424 Csi.4575Citrus sinensis (orange) 
cjap6418 C_AU066491Cryptomeria japonica (Japanese cedar) 
etir5655 S_BP956859Euphorbia tirucalli () 
garb2882 S_BQ413851Gossypium arboreum (tree cotton) 
ghir45833 TC28470Gossypium hirsutum (cotton (tetraploid)) 
ghir54210 BQ413851Gossypium hirsutum (cotton (tetraploid)) 
ltul3184 251385Liriodendron tulipifera () 
lcor11947 Lco.5217Lotus corniculatus (lotus) 
lesc63179 Les.3524Lycopersicon esculentum (tomato) 
lesc65880 Les.3644Lycopersicon esculentum (tomato) 
mdom3048 Mdo.3881Malus x.domestica (apple) 
mtru82960 BG646437Medicago truncatula (barrel medic) 
mgut3519 MgU807Mimulus guttatus (spotted monkey flower) 
nben12418 CK290094Nicotiana benthamiana (wild tobacco) 
nben8738 TC10455Nicotiana benthamiana (wild tobacco) 
nrus8976 NP917493Nicotiana tabacum (common tobacco) 
osat193411 6372.m00147 Protein sequence may be in errorOryza sativa (rice) 
pvul3501 PUT-148a-Phaseolus_vulgaris-4532Phaseolus vulgaris (common bean) 
ppat27908 Ppa.5912Physcomitrella patens () 
pgla5833 TC1795Picea glauca (white spruce) 
ptae41174 DR014851Pinus taeda (loblolly pine) 
ptri5513 S_CV707796Poncirus trifoliata () 
pbal408 Pba.466Populus balsamifera (balsam poplar) 
pnig758 C_BP935145Populus nigra (black poplar) 
ptrc2599 PUT-148a-Populus_trichocarpa-14257Populus trichocarpa (western balsam poplar) 
pers11092 S_AJ823709Prunus persica (peach) 
pers7747 C_BU046272Prunus persica (peach) 
stub43093 Stu.16Solanum tuberosum (potato) 
tcac5313 TheobromacacaoTUC04-08-18.685Theobroma cacao (cocoa) 
taes136929 Ta.12691Triticum aestivum (bread wheat) 
vrip602 S_CK317605Vitis riparia (riverbank grape) 
zaet27 C_AJ700606Zantedeschia aethiopica (calla-lilly) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
peup199  interProS_AJ777836Populus euphratica () 
ptrc5734 PUT-148a-Populus_trichocarpa-21016Populus trichocarpa (western balsam poplar) 
Species
Arabidopsis thaliana  Capsicum annuum  Citrus clementina  Citrus sinensis  Cryptomeria japonica  Euphorbia tirucalli  Gossypium arboreum  Gossypium hirsutum  Liriodendron tulipifera  Lotus corniculatus  Lycopersicon esculentum  Malus x.domestica  Medicago truncatula  Mimulus guttatus  Nicotiana benthamiana  Nicotiana tabacum  Oryza sativa  Phaseolus vulgaris  Physcomitrella patens  Picea glauca  Pinus taeda  Poncirus trifoliata  Populus balsamifera  Populus euphratica  Populus nigra  Populus trichocarpa  Prunus persica  Solanum tuberosum  Theobroma cacao  Triticum aestivum  Vitis riparia  Zantedeschia aethiopica  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha89153 At3g102301
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann13121 NP9163921
  cann14690 TC34271
Citrus clementina ()  ( Select Species     Clear Species)
  ccle4975 PUT-148a-Citrus_clementina-73021
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin8424 Csi.45751
Cryptomeria japonica (Japanese cedar)  ( Select Species     Clear Species)
  cjap6418 C_AU0664911
Euphorbia tirucalli ()  ( Select Species     Clear Species)
  etir5655 S_BP9568591
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb2882 S_BQ4138511
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir45833 TC284701
  ghir54210 BQ4138511
Liriodendron tulipifera ()  ( Select Species     Clear Species)
  ltul3184 2513851
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor11947 Lco.52171
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc63179 Les.35241
  lesc65880 Les.36441
Malus x.domestica (apple)  ( Select Species     Clear Species)
  mdom3048 Mdo.38811
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru82960 BG6464371
Mimulus guttatus (spotted monkey flower)  ( Select Species     Clear Species)
  mgut3519 MgU8071
Nicotiana benthamiana (wild tobacco)  ( Select Species     Clear Species)
  nben12418 CK2900941
  nben8738 TC104551
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus8976 NP9174931
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat193411 6372.m00147 Protein sequence may be in error1
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul3501 PUT-148a-Phaseolus_vulgaris-45321
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat27908 Ppa.59121
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla5833 TC17951
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae41174 DR0148511
Poncirus trifoliata ()  ( Select Species     Clear Species)
  ptri5513 S_CV7077961
Populus balsamifera (balsam poplar)  ( Select Species     Clear Species)
  pbal408 Pba.4661
Populus euphratica ()  ( Select Species     Clear Species)
  peup199 S_AJ7778362
Populus nigra (black poplar)  ( Select Species     Clear Species)
  pnig758 C_BP9351451
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc2599 PUT-148a-Populus_trichocarpa-142571
  ptrc5734 PUT-148a-Populus_trichocarpa-210162
Prunus persica (peach)  ( Select Species     Clear Species)
  pers11092 S_AJ8237091
  pers7747 C_BU0462721
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub43093 Stu.161
Theobroma cacao (cocoa)  ( Select Species     Clear Species)
  tcac5313 TheobromacacaoTUC04-08-18.6851
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes136929 Ta.126911
Vitis riparia (riverbank grape)  ( Select Species     Clear Species)
  vrip602 S_CK3176051
Zantedeschia aethiopica (calla-lilly)  ( Select Species     Clear Species)
  zaet27 C_AJ7006061
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: atha89153 LENGTH: 501 aa
IPR000205
NAD-binding site
PS50205 [85-113]T 9.265 PS50205 NAD_BINDING NAD_BINDING
IPR008671
Lycopene beta and epsilon cyclase
PF05834 [84-479]T 0.0 PF05834 Lycopene_cycl Lycopene_cycl
IPR010108
Lycopene cyclase, beta and epsilon
TIGR01790 [84-481]T 740.95 TIGR01790 carotene-cycl carotene-cycl

Subfamily ID: 2

SEQUENCE: peup199 LENGTH: 164 aa
IPR000205
NAD-binding site
PS50205 [39-67]T 9.172 PS50205 NAD_BINDING NAD_BINDING
IPR013027
FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PF07992 [38-66]T 2.5e-06 PF07992 Pyr_redox_2 Pyr_redox_2
no IPR
PTHR10742 [38-62]T 6.8e-06 PTHR10742 AMINE OXIDASE AMINE OXIDASE
PTHR10742:SF33 [38-62]T 6.8e-06 PTHR10742:SF33 AMINE OXIDASE AMINE OXIDASE
SSF51905 [37-164]T 8.5e-14 SSF51905 FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain
Subfamily
1  2  

Sub family ID: 0
IPR008671: Lycopene beta and epsilon cyclase
Biological ProcessGO:0016117, carotenoid biosynthesis
Molecular FunctionGO:0016705, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
IPR010108: Lycopene cyclase, beta and epsilon
Biological ProcessGO:0016117, carotenoid biosynthesis
 
Sub family ID: 1
IPR008671: Lycopene beta and epsilon cyclase
Biological ProcessGO:0016117, carotenoid biosynthesis
Molecular FunctionGO:0016705, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
IPR010108: Lycopene cyclase, beta and epsilon
Biological ProcessGO:0016117, carotenoid biosynthesis
 
Department of Biology | University of North Carolina at Chapel Hill
Comments / Questions