Search results for family: 3644, total 44 Unipeptides retrieved.


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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
acep15987  interProTC2489Allium cepa (onion) 
acep20026 CF439334Allium cepa (onion) 
atha89997 At4g37000Arabidopsis thaliana (thale cress) 
aoff3337 229535Asparagus officinalis (garden asparagus) 
bvul21545 TC979Beta vulgaris (sugarbeet) 
cann19125 TC7170Capsicum annuum (pepper) 
cric4730 C_CV734877Ceratopteris richardii (water sprite) 
cric6003 S_BE641767Ceratopteris richardii (water sprite) 
etir733 S_BP953652Euphorbia tirucalli () 
ghyb193 322475Gerbera hybrid.cultivar () 
gmax84861 Gma.6955Glycine max (soybean) 
hpar1485 S_CF082221Helianthus paradoxus () 
hvul58536 Hv.8674Hordeum vulgare (barley) 
jreg385 C_CV195929Juglans regia (English walnut) 
lalb308 C_CA409563Lupinus albus (white lupine) 
lesc70724 Les.7895Lycopersicon esculentum (tomato) 
mpol1263 PUT-148a-Marchantia_polymorpha-324Marchantia polymorpha (liverwort) 
msat135 S_CO512601Medicago sativa (alfalfa) 
mtru100492 TC95442Medicago truncatula (barrel medic) 
mtru72911 CX525998Medicago truncatula (barrel medic) 
nrus1248 BP527091Nicotiana tabacum (common tobacco) 
osat133644 Os10g25030Oryza sativa (rice) 
osat140166 Os10g25040Oryza sativa (rice) 
pgin1032 S_CN848493Panax ginseng (ginseng) 
ppat26442 Ppa.4082Physcomitrella patens () 
pgla14941 CO237259Picea glauca (white spruce) 
ptae43225 DR692890Pinus taeda (loblolly pine) 
ptae43482 DR097731Pinus taeda (loblolly pine) 
palb11416 S_CX659257.7kPopulus alba (white poplar) 
palb1935 S_CX659257Populus alba (white poplar) 
peur673 C_CX186984Populus euramericana () 
stub46709 Stu.14113Solanum tuberosum (potato) 
sorg46179 Sbi.8490Sorghum bicolor (sorghum) 
spro3237 S_BG158498Sorghum propinquum () 
trur2221 S_CN207637Tortula ruralis () 
trur2871 S_CN203810Tortula ruralis () 
vvin32169 Vvi.15423Vitis vinifera (wine grape) 
yfil991 275155Yucca filamentosa (spoon-leaf yucca) 
zmay61474 Zm.11378Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
ccle5113  interProPUT-148a-Citrus_clementina-7502Citrus clementina () 
ecal8507 39458Eschscholzia californica (california poppy) 
ghyb5832 329742Gerbera hybrid.cultivar () 
osat147315 Os10g25020Oryza sativa (rice) 
pgla7590 TC10577Picea glauca (white spruce) 
Species
Allium cepa  Arabidopsis thaliana  Asparagus officinalis  Beta vulgaris  Capsicum annuum  Ceratopteris richardii  Citrus clementina  Eschscholzia californica  Euphorbia tirucalli  Gerbera hybrid.cultivar  Glycine max  Helianthus paradoxus  Hordeum vulgare  Juglans regia  Lupinus albus  Lycopersicon esculentum  Marchantia polymorpha  Medicago sativa  Medicago truncatula  Nicotiana tabacum  Oryza sativa  Panax ginseng  Physcomitrella patens  Picea glauca  Pinus taeda  Populus alba  Populus euramericana  Solanum tuberosum  Sorghum bicolor  Sorghum propinquum  Tortula ruralis  Vitis vinifera  Yucca filamentosa  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Allium cepa (onion)  ( Select Species     Clear Species)
  acep15987 TC24891
  acep20026 CF4393341
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha89997 At4g370001
Asparagus officinalis (garden asparagus)  ( Select Species     Clear Species)
  aoff3337 2295351
Beta vulgaris (sugarbeet)  ( Select Species     Clear Species)
  bvul21545 TC9791
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann19125 TC71701
Ceratopteris richardii (water sprite)  ( Select Species     Clear Species)
  cric4730 C_CV7348771
  cric6003 S_BE6417671
Citrus clementina ()  ( Select Species     Clear Species)
  ccle5113 PUT-148a-Citrus_clementina-75022
Eschscholzia californica (california poppy)  ( Select Species     Clear Species)
  ecal8507 394582
Euphorbia tirucalli ()  ( Select Species     Clear Species)
  etir733 S_BP9536521
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb193 3224751
  ghyb5832 3297422
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax84861 Gma.69551
Helianthus paradoxus ()  ( Select Species     Clear Species)
  hpar1485 S_CF0822211
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul58536 Hv.86741
Juglans regia (English walnut)  ( Select Species     Clear Species)
  jreg385 C_CV1959291
Lupinus albus (white lupine)  ( Select Species     Clear Species)
  lalb308 C_CA4095631
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc70724 Les.78951
Marchantia polymorpha (liverwort)  ( Select Species     Clear Species)
  mpol1263 PUT-148a-Marchantia_polymorpha-3241
Medicago sativa (alfalfa)  ( Select Species     Clear Species)
  msat135 S_CO5126011
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru100492 TC954421
  mtru72911 CX5259981
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus1248 BP5270911
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat133644 Os10g250301
  osat140166 Os10g250401
  osat147315 Os10g250202
Panax ginseng (ginseng)  ( Select Species     Clear Species)
  pgin1032 S_CN8484931
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat26442 Ppa.40821
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla14941 CO2372591
  pgla7590 TC105772
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae43225 DR6928901
  ptae43482 DR0977311
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb11416 S_CX659257.7k1
  palb1935 S_CX6592571
Populus euramericana ()  ( Select Species     Clear Species)
  peur673 C_CX1869841
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub46709 Stu.141131
Sorghum bicolor (sorghum)  ( Select Species     Clear Species)
  sorg46179 Sbi.84901
Sorghum propinquum ()  ( Select Species     Clear Species)
  spro3237 S_BG1584981
Tortula ruralis ()  ( Select Species     Clear Species)
  trur2221 S_CN2076371
  trur2871 S_CN2038101
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin32169 Vvi.154231
Yucca filamentosa (spoon-leaf yucca)  ( Select Species     Clear Species)
  yfil991 2751551
Zea mays (corn)  ( Select Species     Clear Species)
  zmay61474 Zm.113781
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: acep15987 LENGTH: 198 aa
IPR009439
Red chlorophyll catabolite reductase
PF06405 [1-198]T 1.2e-60 PF06405 RCC_reductase RCC_reductase

Subfamily ID: 2

SEQUENCE: ccle5113 LENGTH: 127 aa
IPR009439
Red chlorophyll catabolite reductase
PF06405 [22-127]T 4.5e-51 PF06405 RCC_reductase RCC_reductase
no IPR
DOMAIN [1-127]T  DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
Subfamily
1  2  

Sub family ID: 1
IPR009439: Red chlorophyll catabolite reductase
Biological ProcessGO:0015996, chlorophyll catabolism
Cellular ComponentGO:0009507, chloroplast
Molecular FunctionGO:0016491, oxidoreductase activity
 
Sub family ID: 2
IPR009439: Red chlorophyll catabolite reductase
Biological ProcessGO:0015996, chlorophyll catabolism
Cellular ComponentGO:0009507, chloroplast
Molecular FunctionGO:0016491, oxidoreductase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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