Search results for family: 3670, total 19 Unipeptides retrieved.


Related families 3 families found.
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
aame462  interPro280001Acorus americanus (sweetflag) 
acep18583 CF445884Allium cepa (onion) 
atha97832 At2g40550Arabidopsis thaliana (thale cress) 
gmax75970 Gma.7778Glycine max (soybean) 
garb8897 C_BG440027Gossypium arboreum (tree cotton) 
ghir61340 TC33083Gossypium hirsutum (cotton (tetraploid)) 
hvul54886 Hv.9372Hordeum vulgare (barley) 
lcor13080 Lco.6582Lotus corniculatus (lotus) 
mdom1049 Mdo.1363Malus x.domestica (apple) 
osat153226 2776.m00121 Protein sequence may be in errorOryza sativa (rice) 
osat204802 Os01g07260Oryza sativa (rice) 
pers5449 C_AJ873621Prunus persica (peach) 
stub39290 Stu.9349Solanum tuberosum (potato) 
sorg45411 Sbi.7669Sorghum bicolor (sorghum) 
zmay59556 Zm.12394Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
cric4171  interProS_BE642691Ceratopteris richardii (water sprite) 
pgla6010 TC1199Picea glauca (white spruce) 
ptae56401 TC76820Pinus taeda (loblolly pine) 
wmir319 347013Welwitschia mirabilis () 
Species
Acorus americanus  Allium cepa  Arabidopsis thaliana  Ceratopteris richardii  Glycine max  Gossypium arboreum  Gossypium hirsutum  Hordeum vulgare  Lotus corniculatus  Malus x.domestica  Oryza sativa  Picea glauca  Pinus taeda  Prunus persica  Solanum tuberosum  Sorghum bicolor  Welwitschia mirabilis  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame462 2800011
Allium cepa (onion)  ( Select Species     Clear Species)
  acep18583 CF4458841
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha97832 At2g405501
Ceratopteris richardii (water sprite)  ( Select Species     Clear Species)
  cric4171 S_BE6426912
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax75970 Gma.77781
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb8897 C_BG4400271
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir61340 TC330831
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul54886 Hv.93721
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor13080 Lco.65821
Malus x.domestica (apple)  ( Select Species     Clear Species)
  mdom1049 Mdo.13631
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat153226 2776.m00121 Protein sequence may be in error1
  osat204802 Os01g072601
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla6010 TC11992
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae56401 TC768202
Prunus persica (peach)  ( Select Species     Clear Species)
  pers5449 C_AJ8736211
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub39290 Stu.93491
Sorghum bicolor (sorghum)  ( Select Species     Clear Species)
  sorg45411 Sbi.76691
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir319 3470132
Zea mays (corn)  ( Select Species     Clear Species)
  zmay59556 Zm.123941
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: aame462 LENGTH: 347 aa
IPR000875
Cecropin
PS00268 [333-341]? NA PS00268 CECROPIN CECROPIN
no IPR
PTHR13489 [64-347]T 5.9e-144 PTHR13489 FAMILY NOT NAMED FAMILY NOT NAMED
PTHR13489:SF2 [64-347]T 5.9e-144 PTHR13489:SF2 gb def: Hypothetical protein At2g40550 gb def: Hypothetical protein At2g40550

Subfamily ID: 2

SEQUENCE: cric4171 LENGTH: 251 aa
no IPR
PTHR13489 [1-245]T 7.4e-82 PTHR13489 FAMILY NOT NAMED FAMILY NOT NAMED
PTHR13489:SF2 [1-245]T 7.4e-82 PTHR13489:SF2 gb def: Hypothetical protein At2g40550 gb def: Hypothetical protein At2g40550
Subfamily
1  2  

Sub family ID: 1
IPR000875: Cecropin
Biological ProcessGO:0006961, antibacterial humoral response (sensu Protostomia)
Cellular ComponentGO:0005576, extracellular
 
Department of Biology | University of North Carolina at Chapel Hill
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