Search results for family: 3785, total 29 Unipeptides retrieved.


Related families 4 families found.
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
acep13461  interProCF451827Allium cepa (onion) 
brap6390 S_BG544020Brassica rapa (field mustard) 
brap7447 S_BG544020.11kBrassica rapa (field mustard) 
csin10274 Csi.6743Citrus sinensis (orange) 
lesc67620 Les.13604Lycopersicon esculentum (tomato) 
omin1285 S_CB211325Oryza minuta () 
osat191878 3352.m00110 Protein sequence may be in errorOryza sativa (rice) 
pgin873 S_CN848313Panax ginseng (ginseng) 
phyb863 S_CV299685Petunia x.hybrida (petunia) 
pgla5618 CO237772Picea glauca (white spruce) 
pdel3140 S_CX173360Populus deltoides () 
peup2814 S_AJ776163Populus euphratica () 
ptrc461 PUT-148a-Populus_trichocarpa-14910Populus trichocarpa (western balsam poplar) 
ptrc8272 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-662Populus trichocarpa (western balsam poplar) 
vvin33925 Vvi.13993Vitis vinifera (wine grape) 
zele9547 PUT-148a-Zinnia_elegans-2576Zinnia elegans (zinnia) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
atha108369  interProAt5g47435Arabidopsis thaliana (thale cress) 
atha85855 At4g17360Arabidopsis thaliana (thale cress) 
gmax75400 Gma.4813Glycine max (soybean) 
mesc1020 S_CK645217Manihot esculenta (cassava) 
mtru71848 TC108839Medicago truncatula (barrel medic) 
mtru90918 TC102740Medicago truncatula (barrel medic) 
osat172590 Os03g01220Oryza sativa (rice) 
pgla10310 TC9523Picea glauca (white spruce) 
ptae65302 TC64308Pinus taeda (loblolly pine) 
rpse577 S_BI642899Robinia pseudoacacia () 
stub43940 Stu.10531Solanum tuberosum (potato) 
taes129941 Ta.27045Triticum aestivum (bread wheat) 
zmay71022 Zm.8710Zea mays (corn) 
Species
Allium cepa  Arabidopsis thaliana  Brassica rapa  Citrus sinensis  Glycine max  Lycopersicon esculentum  Manihot esculenta  Medicago truncatula  Oryza minuta  Oryza sativa  Panax ginseng  Petunia x.hybrida  Picea glauca  Pinus taeda  Populus deltoides  Populus euphratica  Populus trichocarpa  Robinia pseudoacacia  Solanum tuberosum  Triticum aestivum  Vitis vinifera  Zea mays  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Allium cepa (onion)  ( Select Species     Clear Species)
  acep13461 CF4518271
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha108369 At5g474352
  atha85855 At4g173602
Brassica rapa (field mustard)  ( Select Species     Clear Species)
  brap6390 S_BG5440201
  brap7447 S_BG544020.11k1
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin10274 Csi.67431
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax75400 Gma.48132
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc67620 Les.136041
Manihot esculenta (cassava)  ( Select Species     Clear Species)
  mesc1020 S_CK6452172
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru71848 TC1088392
  mtru90918 TC1027402
Oryza minuta ()  ( Select Species     Clear Species)
  omin1285 S_CB2113251
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat172590 Os03g012202
  osat191878 3352.m00110 Protein sequence may be in error1
Panax ginseng (ginseng)  ( Select Species     Clear Species)
  pgin873 S_CN8483131
Petunia x.hybrida (petunia)  ( Select Species     Clear Species)
  phyb863 S_CV2996851
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla10310 TC95232
  pgla5618 CO2377721
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae65302 TC643082
Populus deltoides ()  ( Select Species     Clear Species)
  pdel3140 S_CX1733601
Populus euphratica ()  ( Select Species     Clear Species)
  peup2814 S_AJ7761631
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc461 PUT-148a-Populus_trichocarpa-149101
  ptrc8272 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-6621
Robinia pseudoacacia ()  ( Select Species     Clear Species)
  rpse577 S_BI6428992
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub43940 Stu.105312
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes129941 Ta.270452
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin33925 Vvi.139931
Zea mays (corn)  ( Select Species     Clear Species)
  zmay71022 Zm.87102
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele9547 PUT-148a-Zinnia_elegans-25761
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: acep13461 LENGTH: 175 aa
IPR002376
Formyl transferase, N-terminal
SSF53328 [92-167]T 3.5e-10 SSF53328 Formyltransferase Formyltransferase
IPR004810
Formyltetrahydrofolate deformylase
PR01575 [9-35]T 4.5e-17 PR01575 FFH4HYDRLASE[41-53]T 4.5e-17 PR01575 FFH4HYDRLASE[93-115]T 4.5e-17 PR01575 FFH4HYDRLASE[115-142]T 4.5e-17 PR01575 FFH4HYDRLASE FFH4HYDRLASE
no IPR
SSF55021 [5-87]T 1.6e-05 SSF55021 Regulatory domain in the aminoacid metabolism Regulatory domain in the aminoacid metabolism

Subfamily ID: 2

SEQUENCE: atha108369 LENGTH: 323 aa
IPR002376
Formyl transferase, N-terminal
PF00551 [126-304]T 1.2E-24 PF00551 Formyl_trans_N Formyl_trans_N
SSF53328 [127-323]T 3.3999999999999997E-38 SSF53328 formyl_transf formyl_transf
IPR004810
Formyltetrahydrofolate deformylase
PIRSF036480 [38-323]T 5.8E-82 PIRSF036480 FormyFH4_hydr FormyFH4_hydr
PR01575 [42-68]T 8.4E-28 PR01575 FFH4HYDRLASE[127-149]T 8.4E-28 PR01575 FFH4HYDRLASE[149-176]T 8.4E-28 PR01575 FFH4HYDRLASE[274-296]T 8.4E-28 PR01575 FFH4HYDRLASE[296-321]T 8.4E-28 PR01575 FFH4HYDRLASE FFH4HYDRLASE
Subfamily
1  2  

Sub family ID: 1
IPR002376: Formyl transferase, N-terminal
Biological ProcessGO:0009058, biosynthesis
Molecular FunctionGO:0016742, hydroxymethyl-, formyl- and related transferase activity
IPR004810: Formyltetrahydrofolate deformylase
Biological ProcessGO:0006189, 'de novo' IMP biosynthesis
Molecular FunctionGO:0008864, formyltetrahydrofolate deformylase activity
 
Sub family ID: 2
IPR002376: Formyl transferase, N-terminal
Biological ProcessGO:0009058, biosynthesis
Molecular FunctionGO:0016742, hydroxymethyl-, formyl- and related transferase activity
IPR004810: Formyltetrahydrofolate deformylase
Biological ProcessGO:0006189, 'de novo' IMP biosynthesis
Molecular FunctionGO:0008864, formyltetrahydrofolate deformylase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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