Search results for family: 5450, total 16 Unipeptides retrieved.


Related families 7 families found.
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
atha79211  interProAtMg00513Arabidopsis thaliana (thale cress) 
atha83963 AtMg00665Arabidopsis thaliana (thale cress) 
atha87528 AtMg00060Arabidopsis thaliana (thale cress) 
bvul21762 TC2726Beta vulgaris (sugarbeet) 
csin10361 Csi.6846Citrus sinensis (orange) 
nadv152 357856Nuphar advena () 
pnig1470 S_BP931712Populus nigra (black poplar) 
zfis9 342707Zamia fischeri (calla-lilly) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
atha106197 AtCg01010Arabidopsis thaliana (thale cress) 
aoff3927  interPro228873Asparagus officinalis (garden asparagus) 
csin10381 Csi.6870Citrus sinensis (orange) 
ghir51094 TC28021Gossypium hirsutum (cotton (tetraploid)) 
nrus11178 TC2090Nicotiana tabacum (common tobacco) 
pglu409 S_CD726624Pennisetum glaucum (cattail millet) 
zfis1161 345389Zamia fischeri (calla-lilly) 
zele8166 PUT-148a-Zinnia_elegans-304Zinnia elegans (zinnia) 
Species
Arabidopsis thaliana  Asparagus officinalis  Beta vulgaris  Citrus sinensis  Gossypium hirsutum  Nicotiana tabacum  Nuphar advena  Pennisetum glaucum  Populus nigra  Zamia fischeri  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha106197 AtCg010102
  atha79211 AtMg005131
  atha83963 AtMg006651
  atha87528 AtMg000601
Asparagus officinalis (garden asparagus)  ( Select Species     Clear Species)
  aoff3927 2288732
Beta vulgaris (sugarbeet)  ( Select Species     Clear Species)
  bvul21762 TC27261
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin10361 Csi.68461
  csin10381 Csi.68702
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir51094 TC280212
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus11178 TC20902
Nuphar advena ()  ( Select Species     Clear Species)
  nadv152 3578561
Pennisetum glaucum (cattail millet)  ( Select Species     Clear Species)
  pglu409 S_CD7266242
Populus nigra (black poplar)  ( Select Species     Clear Species)
  pnig1470 S_BP9317121
Zamia fischeri (calla-lilly)  ( Select Species     Clear Species)
  zfis1161 3453892
  zfis9 3427071
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele8166 PUT-148a-Zinnia_elegans-3042
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: atha79211 LENGTH: 669 aa
IPR001516
NADH-Ubiquinone oxidoreductase (complex I), chain 5/L, N-terminal
PF00662 [58-119]T 3.2e-31 PF00662 Oxidored_q1_N Oxidored_q1_N
IPR001750
NADH/Ubiquinone/plastoquinone (complex I)
PF00361 [130-426]T 3.1e-95 PF00361 Oxidored_q1 Oxidored_q1
IPR003916
NADH-ubiquinone oxidoreductase, chain 5
PR01434 [79-104]T 1.7e-57 PR01434 NADHDHGNASE5[107-127]T 1.7e-57 PR01434 NADHDHGNASE5[154-175]T 1.7e-57 PR01434 NADHDHGNASE5[228-249]T 1.7e-57 PR01434 NADHDHGNASE5[250-276]T 1.7e-57 PR01434 NADHDHGNASE5[318-330]T 1.7e-57 PR01434 NADHDHGNASE5[423-442]T 1.7e-57 PR01434 NADHDHGNASE5 NADHDHGNASE5
IPR003945
NADH-plastoquinone oxidoreductase, chain 5
TIGR01974 [1-640]T 2.5e-240 TIGR01974 NDH_I_L: proton-translocating NADH-quinone o NDH_I_L: proton-translocating NADH-quinone o
IPR010934
NADH dehydrogenase subunit 5, C-terminal
PF06455 [433-637]T 3.7e-05 PF06455 NADH5_C NADH5_C
no IPR
DOMAIN [1-2]T DOMAIN DOMAIN N-REGION.[3-12]T DOMAIN DOMAIN H-REGION.[13-17]T DOMAIN DOMAIN C-REGION.[51-56]T DOMAIN DOMAIN CYTOPLASMIC.[102-112]T DOMAIN DOMAIN CYTOPLASMIC.[156-214]T DOMAIN DOMAIN CYTOPLASMIC.[271-281]T DOMAIN DOMAIN CYTOPLASMIC.[331-341]T DOMAIN DOMAIN CYTOPLASMIC.[400-419]T DOMAIN DOMAIN CYTOPLASMIC.[482-620]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
PTHR22773 [99-478]T 3e-209 PTHR22773 NADH DEHYDROGENASE[499-639]T 3e-209 PTHR22773 NADH DEHYDROGENASE NADH DEHYDROGENASE
PTHR22773:SF17 [99-478]T 3e-209 PTHR22773:SF17 NADH DEHYDROGENASE SUBUNIT 5[499-639]T 3e-209 PTHR22773:SF17 NADH DEHYDROGENASE SUBUNIT 5 NADH DEHYDROGENASE SUBUNIT 5
SIGNAL [1-17]T SIGNAL SIGNAL SIGNAL
TRANSMEM [27-50]T TRANSMEM TRANSMEM [57-77]T TRANSMEM TRANSMEM [83-101]T TRANSMEM TRANSMEM [113-130]T TRANSMEM TRANSMEM [136-155]T TRANSMEM TRANSMEM [215-234]T TRANSMEM TRANSMEM [254-270]T TRANSMEM TRANSMEM [282-304]T TRANSMEM TRANSMEM [310-330]T TRANSMEM TRANSMEM [342-359]T TRANSMEM TRANSMEM [379-399]T TRANSMEM TRANSMEM [420-443]T TRANSMEM TRANSMEM [463-481]T TRANSMEM TRANSMEM [621-642]T TRANSMEM TRANSMEM TRANSMEM

Subfamily ID: 2

SEQUENCE: aoff3927 LENGTH: 241 aa
IPR001516
NADH-Ubiquinone oxidoreductase (complex I), chain 5/L, N-terminal
PF00662 [59-120]T 1.6e-24 PF00662 Oxidored_q1_N Oxidored_q1_N
IPR001750
NADH/Ubiquinone/plastoquinone (complex I)
PF00361 [131-241]T 1.4e-45 PF00361 Oxidored_q1 Oxidored_q1
IPR003916
NADH-ubiquinone oxidoreductase, chain 5
PR01434 [80-105]T 4e-45 PR01434 NADHDHGNASE5[108-128]T 4e-45 PR01434 NADHDHGNASE5[155-176]T 4e-45 PR01434 NADHDHGNASE5[226-247]T 4e-45 PR01434 NADHDHGNASE5 NADHDHGNASE5
IPR003945
NADH-plastoquinone oxidoreductase, chain 5
PR01435 [34-53]T 5.3e-35 PR01435 NPOXDRDTASE5[56-80]T 5.3e-35 PR01435 NPOXDRDTASE5[82-102]T 5.3e-35 PR01435 NPOXDRDTASE5 NPOXDRDTASE5
no IPR
DOMAIN [24-29]T DOMAIN DOMAIN CYTOPLASMIC.[100-110]T DOMAIN DOMAIN CYTOPLASMIC.[158-168]T DOMAIN DOMAIN CYTOPLASMIC.[230-241]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
PTHR22773 [100-193]T 1e-90 PTHR22773 NADH DEHYDROGENASE[210-241]T 1e-90 PTHR22773 NADH DEHYDROGENASE NADH DEHYDROGENASE
PTHR22773:SF21 [100-193]T 1e-90 PTHR22773:SF21 NADH-PLASTOQUINONE OXIDOREDUCTASE CHAIN 5, CHLOROPLAST[210-241]T 1e-90 PTHR22773:SF21 NADH-PLASTOQUINONE OXIDOREDUCTASE CHAIN 5, CHLOROPLAST NADH-PLASTOQUINONE OXIDOREDUCTASE CHAIN 5, CHLOROPLAST
SSF55550 [125-224]T 0.0014 SSF55550 SH2 domain SH2 domain
TRANSMEM [6-23]T TRANSMEM TRANSMEM [30-50]T TRANSMEM TRANSMEM [78-99]T TRANSMEM TRANSMEM [111-129]T TRANSMEM TRANSMEM [135-157]T TRANSMEM TRANSMEM [169-190]T TRANSMEM TRANSMEM [210-229]T TRANSMEM TRANSMEM TRANSMEM
Subfamily
1  2  

Sub family ID: 0
IPR001750: NADH/Ubiquinone/plastoquinone (complex I)
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR002128: NADH dehydrogenase (ubiquinone), chloroplast chain 5, C-terminal
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Cellular ComponentGO:0009507, chloroplast
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR003916: NADH-ubiquinone oxidoreductase, chain 5
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR003945: NADH-plastoquinone oxidoreductase, chain 5
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
 
Sub family ID: 1
IPR001516: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L, N-terminal
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR001750: NADH/Ubiquinone/plastoquinone (complex I)
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR003916: NADH-ubiquinone oxidoreductase, chain 5
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR003945: NADH-plastoquinone oxidoreductase, chain 5
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR010934: NADH dehydrogenase subunit 5, C-terminal
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
 
Sub family ID: 2
IPR001516: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L, N-terminal
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR001750: NADH/Ubiquinone/plastoquinone (complex I)
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR003916: NADH-ubiquinone oxidoreductase, chain 5
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
IPR003945: NADH-plastoquinone oxidoreductase, chain 5
Biological ProcessGO:0042773, ATP synthesis coupled electron transport
Molecular FunctionGO:0008137, NADH dehydrogenase (ubiquinone) activity
 
Department of Biology | University of North Carolina at Chapel Hill
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