Search results for family: 872, total 70 Unipeptides retrieved.


Related families 18 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  3  4  5  6  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
aame1501  interPro281100Acorus americanus (sweetflag) 
acep11923 TC389Allium cepa (onion) 
atri9912 201094Amborella trichopoda (amborella) 
amaj1551 S_AJ796137Antirrhinum majus (snapdragon) 
atha82454 At4g00660Arabidopsis thaliana (thale cress) 
bvul14560 TC3252Beta vulgaris (sugarbeet) 
bvul21146 TC2228Beta vulgaris (sugarbeet) 
csie109 S_CV014756Camellia sinensis (black tea) 
ecal6841 37817Eschscholzia californica (california poppy) 
eesu50 S_BG459031Euphorbia esula (leafy spurge) 
fana1320 S_CO817651Fragaria x.ananassa (strawberry) 
ghir53957 CO118667Gossypium hirsutum (cotton (tetraploid)) 
ghir67863 TC28049Gossypium hirsutum (cotton (tetraploid)) 
jreg18 S_CV197834Juglans regia (English walnut) 
lsat52672 Lsa.8923Lactuca sativa (lettuce) 
lsat53175 Lsa.9464Lactuca sativa (lettuce) 
ltul166 247496Liriodendron tulipifera () 
lesc66747 Les.12487Lycopersicon esculentum (tomato) 
lesc68519 Les.6655Lycopersicon esculentum (tomato) 
mesc3590 C_CK642995Manihot esculenta (cassava) 
mtru80987 TC94617Medicago truncatula (barrel medic) 
nben7023 TC9335Nicotiana benthamiana (wild tobacco) 
nadv3706 353070Nuphar advena () 
osat136800 Os02g42860Oryza sativa (rice) 
osat175121 Os04g45040Oryza sativa (rice) 
osat181452 2512.m00088 Protein sequence may be in errorOryza sativa (rice) 
pcoc11357 S_CA914146Phaseolus coccineus () 
pvul6919 PUT-148a-Phaseolus_vulgaris-8867Phaseolus vulgaris (common bean) 
ptri1224 C_CV705974Poncirus trifoliata () 
palb3655 C_CF231885Populus alba (white poplar) 
palb8885 C_CF231885.11kPopulus alba (white poplar) 
peur1065 S_CX177559Populus euramericana () 
ptrc14949 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-9766Populus trichocarpa (western balsam poplar) 
pdul81 S_BU572950Prunus dulcis (almond) 
pers8945 C_BU042344Prunus persica (peach) 
shen113 307051Saruma henryi () 
stub34886 Stu.16435Solanum tuberosum (potato) 
stub45908 Stu.4594Solanum tuberosum (potato) 
sreb5882 S_BG522301Stevia rebaudiana (stevia) 
tmon628 PUT-148a-Triticum_monococcum-897Triticum monococcum (einkorn wheat) 
vshu1618 C_CV097115Vitis shuttleworthii (calloose grape) 
vvin33767 Vvi.12384Vitis vinifera (wine grape) 
zmay72318 Zm.23067Zea mays (corn) 
zele18298 PUT-148a-Zinnia_elegans-14415754Zinnia elegans (zinnia) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
aoff2195  interPro229186Asparagus officinalis (garden asparagus) 
ccle3450 PUT-148a-Citrus_clementina-5104Citrus clementina () 
ecal9755 41478Eschscholzia californica (california poppy) 
ghir46593 TC35996Gossypium hirsutum (cotton (tetraploid)) 
ghir72746 TC28047Gossypium hirsutum (cotton (tetraploid)) 
grai650 Gra.668Gossypium raimondii () 
pvul1777 PUT-148a-Phaseolus_vulgaris-2286Phaseolus vulgaris (common bean) 
pgla3216 CO242052Picea glauca (white spruce) 
pgla7188 CK443110Picea glauca (white spruce) 
ptrc12702 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-16334Populus trichocarpa (western balsam poplar) 
ptrc8456 PUT-148a-Populus_trichocarpa-18881Populus trichocarpa (western balsam poplar) 
zmay73756 Zm.27279Zea mays (corn) 
Subfamily ID: 3( Select Subfamily     Clear Subfamily)
atha108125  interProAt2g45810Arabidopsis thaliana (thale cress) 
atha90216 At3g61240Arabidopsis thaliana (thale cress) 
osat156495 43.m00087 Protein sequence may be in errorOryza sativa (rice) 
osat173662 Os10g35990Oryza sativa (rice) 
spro6067 C_BG052850Sorghum propinquum () 
wmir3431 350824Welwitschia mirabilis () 
zmay73168 Zm.21972Zea mays (corn) 
Subfamily ID: 4( Select Subfamily     Clear Subfamily)
bnap15964  interProBna.2663Brassica napus (rapeseed) 
ecal7793 37812Eschscholzia californica (california poppy) 
mtru72431 TC94616Medicago truncatula (barrel medic) 
ptae59496 DR177870Pinus taeda (loblolly pine) 
ptae60745 TC60387Pinus taeda (loblolly pine) 
Subfamily ID: 5( Select Subfamily     Clear Subfamily)
zele18297  interProPUT-148a-Zinnia_elegans-14415753Zinnia elegans (zinnia) 
Subfamily ID: 6( Select Subfamily     Clear Subfamily)
gsoj5495  interProPUT-148a-Glycine_soja-8414Glycine soja (wild soybean) 
Species
Acorus americanus  Allium cepa  Amborella trichopoda  Antirrhinum majus  Arabidopsis thaliana  Asparagus officinalis  Beta vulgaris  Brassica napus  Camellia sinensis  Citrus clementina  Eschscholzia californica  Euphorbia esula  Fragaria x.ananassa  Glycine soja  Gossypium hirsutum  Gossypium raimondii  Juglans regia  Lactuca sativa  Liriodendron tulipifera  Lycopersicon esculentum  Manihot esculenta  Medicago truncatula  Nicotiana benthamiana  Nuphar advena  Oryza sativa  Phaseolus coccineus  Phaseolus vulgaris  Picea glauca  Pinus taeda  Poncirus trifoliata  Populus alba  Populus euramericana  Populus trichocarpa  Prunus dulcis  Prunus persica  Saruma henryi  Solanum tuberosum  Sorghum propinquum  Stevia rebaudiana  Triticum monococcum  Vitis shuttleworthii  Vitis vinifera  Welwitschia mirabilis  Zea mays  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame1501 2811001
Allium cepa (onion)  ( Select Species     Clear Species)
  acep11923 TC3891
Amborella trichopoda (amborella)  ( Select Species     Clear Species)
  atri9912 2010941
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj1551 S_AJ7961371
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha108125 At2g458103
  atha82454 At4g006601
  atha90216 At3g612403
Asparagus officinalis (garden asparagus)  ( Select Species     Clear Species)
  aoff2195 2291862
Beta vulgaris (sugarbeet)  ( Select Species     Clear Species)
  bvul14560 TC32521
  bvul21146 TC22281
Brassica napus (rapeseed)  ( Select Species     Clear Species)
  bnap15964 Bna.26634
Camellia sinensis (black tea)  ( Select Species     Clear Species)
  csie109 S_CV0147561
Citrus clementina ()  ( Select Species     Clear Species)
  ccle3450 PUT-148a-Citrus_clementina-51042
Eschscholzia californica (california poppy)  ( Select Species     Clear Species)
  ecal6841 378171
  ecal7793 378124
  ecal9755 414782
Euphorbia esula (leafy spurge)  ( Select Species     Clear Species)
  eesu50 S_BG4590311
Fragaria x.ananassa (strawberry)  ( Select Species     Clear Species)
  fana1320 S_CO8176511
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj5495 PUT-148a-Glycine_soja-84146
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir46593 TC359962
  ghir53957 CO1186671
  ghir67863 TC280491
  ghir72746 TC280472
Gossypium raimondii ()  ( Select Species     Clear Species)
  grai650 Gra.6682
Juglans regia (English walnut)  ( Select Species     Clear Species)
  jreg18 S_CV1978341
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat52672 Lsa.89231
  lsat53175 Lsa.94641
Liriodendron tulipifera ()  ( Select Species     Clear Species)
  ltul166 2474961
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc66747 Les.124871
  lesc68519 Les.66551
Manihot esculenta (cassava)  ( Select Species     Clear Species)
  mesc3590 C_CK6429951
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru72431 TC946164
  mtru80987 TC946171
Nicotiana benthamiana (wild tobacco)  ( Select Species     Clear Species)
  nben7023 TC93351
Nuphar advena ()  ( Select Species     Clear Species)
  nadv3706 3530701
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat136800 Os02g428601
  osat156495 43.m00087 Protein sequence may be in error3
  osat173662 Os10g359903
  osat175121 Os04g450401
  osat181452 2512.m00088 Protein sequence may be in error1
Phaseolus coccineus ()  ( Select Species     Clear Species)
  pcoc11357 S_CA9141461
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul1777 PUT-148a-Phaseolus_vulgaris-22862
  pvul6919 PUT-148a-Phaseolus_vulgaris-88671
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla3216 CO2420522
  pgla7188 CK4431102
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae59496 DR1778704
  ptae60745 TC603874
Poncirus trifoliata ()  ( Select Species     Clear Species)
  ptri1224 C_CV7059741
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb3655 C_CF2318851
  palb8885 C_CF231885.11k1
Populus euramericana ()  ( Select Species     Clear Species)
  peur1065 S_CX1775591
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc12702 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-163342
  ptrc14949 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-97661
  ptrc8456 PUT-148a-Populus_trichocarpa-188812
Prunus dulcis (almond)  ( Select Species     Clear Species)
  pdul81 S_BU5729501
Prunus persica (peach)  ( Select Species     Clear Species)
  pers8945 C_BU0423441
Saruma henryi ()  ( Select Species     Clear Species)
  shen113 3070511
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub34886 Stu.164351
  stub45908 Stu.45941
Sorghum propinquum ()  ( Select Species     Clear Species)
  spro6067 C_BG0528503
Stevia rebaudiana (stevia)  ( Select Species     Clear Species)
  sreb5882 S_BG5223011
Triticum monococcum (einkorn wheat)  ( Select Species     Clear Species)
  tmon628 PUT-148a-Triticum_monococcum-8971
Vitis shuttleworthii (calloose grape)  ( Select Species     Clear Species)
  vshu1618 C_CV0971151
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin33767 Vvi.123841
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir3431 3508243
Zea mays (corn)  ( Select Species     Clear Species)
  zmay72318 Zm.230671
  zmay73168 Zm.219723
  zmay73756 Zm.272792
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele18297 PUT-148a-Zinnia_elegans-144157535
  zele18298 PUT-148a-Zinnia_elegans-144157541
Subfamily
1  2  3  4  5  6  

Subfamily ID: 1

SEQUENCE: aame1501 LENGTH: 223 aa
IPR001410
DEAD/DEAH box helicase
PS50136 [181-223]T 10.430 PS50136 HELICASE HELICASE
IPR011545
DEAD/DEAH box helicase, N-terminal
PF00270 [134-223]T 6.9e-32 PF00270 DEAD DEAD
no IPR
PTHR10967 [17-33]T 1.7e-35 PTHR10967 DEAD BOX ATP-DEPENDENT RNA HELICASE[102-223]T 1.7e-35 PTHR10967 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
PTHR10967:SF1 [17-33]T 1.7e-35 PTHR10967:SF1 DEAD BOX ATP-DEPENDENT RNA HELICASE[102-223]T 1.7e-35 PTHR10967:SF1 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
SSF52540 [34-222]T 1.2e-26 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 2

SEQUENCE: aoff2195 LENGTH: 178 aa
IPR011545
DEAD/DEAH box helicase, N-terminal
PF00270 [137-177]T 5.6e-14 PF00270 DEAD DEAD
no IPR
PTHR10967 [114-175]T 4.2e-20 PTHR10967 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
PTHR10967:SF1 [114-175]T 4.2e-20 PTHR10967:SF1 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
SSF52540 [89-176]T 5e-13 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 3

SEQUENCE: atha108125 LENGTH: 528 aa
IPR000629
ATP-dependent helicase, DEAD-box
PS00039 [301-309]T 0.0 PS00039 DEAD_ATP_HELICASE DEAD_ATP_HELICASE
IPR001410
DEAD/DEAH box helicase
PS50136 [225-484]T 48.07 PS50136 HELICASE HELICASE
IPR001650
Helicase, C-terminal
PF00271 [410-486]T 8.7E-30 PF00271 Helicase_C Helicase_C
SM00490 [405-486]T 1.0E-29 SM00490 HELICc HELICc
IPR011545
DEAD/DEAH box helicase, N-terminal
PF00270 [177-344]T 2.8999999999999997E-59 PF00270 DEAD DEAD
SM00487 [173-369]T 4.6E-51 SM00487 DEXDc DEXDc

Subfamily ID: 4

SEQUENCE: bnap15964 LENGTH: 160 aa
IPR011545
DEAD/DEAH box helicase, N-terminal
PF00270 [114-151]T 4.9e-12 PF00270 DEAD DEAD
no IPR
PTHR10967 [91-151]T 4.5e-19 PTHR10967 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
PTHR10967:SF1 [91-151]T 4.5e-19 PTHR10967:SF1 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
SSF52540 [64-151]T 1.1e-11 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 5

SEQUENCE: zele18297 LENGTH: 101 aa
IPR001410
DEAD/DEAH box helicase
PS50136 [84-101]T 8.546 PS50136 HELICASE HELICASE
IPR011545
DEAD/DEAH box helicase, N-terminal
PF00270 [37-101]T 1.8e-24 PF00270 DEAD DEAD
no IPR
PTHR10967 [14-101]T 1.6e-31 PTHR10967 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
PTHR10967:SF1 [14-101]T 1.6e-31 PTHR10967:SF1 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
SSF52540 [1-101]T 1.2e-19 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 6

SEQUENCE: gsoj5495 LENGTH: 192 aa
IPR001410
DEAD/DEAH box helicase
PS50136 [169-192]T 9.082 PS50136 HELICASE HELICASE
IPR011545
DEAD/DEAH box helicase, N-terminal
PF00270 [122-192]T 5.2e-27 PF00270 DEAD DEAD
no IPR
PTHR10967 [32-46]T 2.8e-32 PTHR10967 DEAD BOX ATP-DEPENDENT RNA HELICASE[90-192]T 2.8e-32 PTHR10967 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
PTHR10967:SF1 [32-46]T 2.8e-32 PTHR10967:SF1 DEAD BOX ATP-DEPENDENT RNA HELICASE[90-192]T 2.8e-32 PTHR10967:SF1 DEAD BOX ATP-DEPENDENT RNA HELICASE DEAD BOX ATP-DEPENDENT RNA HELICASE
SSF52540 [31-192]T 1.7e-23 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases
Subfamily
1  2  3  4  5  6  

Sub family ID: 0
IPR001410: DEAD/DEAH box helicase
Molecular FunctionGO:0005524, ATP binding
GO:0008026, ATP-dependent helicase activity
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 1
IPR001410: DEAD/DEAH box helicase
Molecular FunctionGO:0005524, ATP binding
GO:0008026, ATP-dependent helicase activity
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 2
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 3
IPR000629: ATP-dependent helicase, DEAD-box
Molecular FunctionGO:0003676, nucleic acid binding
GO:0005524, ATP binding
GO:0008026, ATP-dependent helicase activity
IPR001410: DEAD/DEAH box helicase
Molecular FunctionGO:0005524, ATP binding
GO:0008026, ATP-dependent helicase activity
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 4
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 5
IPR001410: DEAD/DEAH box helicase
Molecular FunctionGO:0005524, ATP binding
GO:0008026, ATP-dependent helicase activity
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 6
IPR001410: DEAD/DEAH box helicase
Molecular FunctionGO:0005524, ATP binding
GO:0008026, ATP-dependent helicase activity
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Department of Biology | University of North Carolina at Chapel Hill
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