Search results for family: 895, total 66 Unipeptides retrieved.


Related families 11 families found.
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  3  4  5  6  7  8  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
atha101214  interProAt1g11100Arabidopsis thaliana (thale cress) 
atha104655 At1g50410Arabidopsis thaliana (thale cress) 
atha106100 At5g43530Arabidopsis thaliana (thale cress) 
atha82802 At3g16600Arabidopsis thaliana (thale cress) 
atha83264 At1g61140Arabidopsis thaliana (thale cress) 
atha84219 At3g20010Arabidopsis thaliana (thale cress) 
atha85837 At5g22750Arabidopsis thaliana (thale cress) 
bnap15231 Bna.1892Brassica napus (rapeseed) 
ghyb6656 330856Gerbera hybrid.cultivar () 
gmax72968 Gma.3239Glycine max (soybean) 
gmax82194 Gma.7692Glycine max (soybean) 
ghir54550 TC35554Gossypium hirsutum (cotton (tetraploid)) 
hpar2757 S_CF076236Helianthus paradoxus () 
hvul58310 Hv.10978Hordeum vulgare (barley) 
hvul59271 Hv.7266Hordeum vulgare (barley) 
lcor10634 Lco.3487Lotus corniculatus (lotus) 
mtru93288 TC103609Medicago truncatula (barrel medic) 
nrus8959 BP532651Nicotiana tabacum (common tobacco) 
nadv4718 358616Nuphar advena () 
osat142504 5755.m00087 Protein sequence may be in errorOryza sativa (rice) 
osat145095 Os04g53720Oryza sativa (rice) 
osat149524 4282.m00161 Protein sequence may be in errorOryza sativa (rice) 
osat164676 6101.m00137 Protein sequence may be in errorOryza sativa (rice) 
osat176941 Os07g32730Oryza sativa (rice) 
osat204726 Os01g57110Oryza sativa (rice) 
osat212460 3849.m00136 Protein sequence may be in errorOryza sativa (rice) 
pvir3486 C_DN152557Panicum virgatum (switchgrass) 
phyb1635 S_CV294510Petunia x.hybrida (petunia) 
ppat25559 Ppa.2900Physcomitrella patens () 
ppat25582 Ppa.2937Physcomitrella patens () 
ptae31853 TC62792Pinus taeda (loblolly pine) 
ptae49917 TC77935Pinus taeda (loblolly pine) 
palb4264 S_CF236268Populus alba (white poplar) 
palb8188 S_CF236268.11kPopulus alba (white poplar) 
peup2645 S_AJ775117Populus euphratica () 
ptrc17908 PUT-148a-Populus_trichocarpa_x_Populus_nigra-3062Populus trichocarpa (western balsam poplar) 
pers9893 C_BU045442Prunus persica (peach) 
soff3404 Sof.4342Saccharum officinarum (sugar cane) 
smil3981 S_CV163159Salvia miltiorrhiza (redroot sage) 
stub45423 Stu.16752Solanum tuberosum (potato) 
stub46156 Stu.16414Solanum tuberosum (potato) 
spro5490 C_BF480932Sorghum propinquum () 
trur182 S_CN202108Tortula ruralis () 
taes128014 Ta.16121Triticum aestivum (bread wheat) 
vvin27227 Vvi.5599Vitis vinifera (wine grape) 
vvin28417 Vvi.8821Vitis vinifera (wine grape) 
wmir2489 349578Welwitschia mirabilis () 
zmay61744 Zm.16520Zea mays (corn) 
zmay70376 Zm.6479Zea mays (corn) 
zmay74565 Zm.26326Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
atha101251  interProAt5g05130Arabidopsis thaliana (thale cress) 
harg1006 S_CF088768Helianthus argophyllus () 
lsat48654 Lsa.4732Lactuca sativa (lettuce) 
mtru97175 BG584027Medicago truncatula (barrel medic) 
osat147998 Os07g44800Oryza sativa (rice) 
pgla9074 CO239662Picea glauca (white spruce) 
ptae45168 DR178042Pinus taeda (loblolly pine) 
ptrc10587 PUT-148a-Populus_trichocarpa-18586Populus trichocarpa (western balsam poplar) 
tcac5125 TheobromacacaoTUC04-08-18.475Theobroma cacao (cocoa) 
zmay63720 Zm.6318Zea mays (corn) 
Subfamily ID: 3( Select Subfamily     Clear Subfamily)
osat199130  interProOs08g08220Oryza sativa (rice) 
Subfamily ID: 4( Select Subfamily     Clear Subfamily)
osat150357  interPro3061.m00332 Protein sequence may be in errorOryza sativa (rice) 
Subfamily ID: 5( Select Subfamily     Clear Subfamily)
acep21706  interProTC3453Allium cepa (onion) 
Subfamily ID: 6( Select Subfamily     Clear Subfamily)
shen4720  interPro312412Saruma henryi () 
Subfamily ID: 7( Select Subfamily     Clear Subfamily)
osat152639  interProOs01g72310Oryza sativa (rice) 
Subfamily ID: 8( Select Subfamily     Clear Subfamily)
acep14757  interProCF439477Allium cepa (onion) 
Species
Allium cepa  Arabidopsis thaliana  Brassica napus  Gerbera hybrid.cultivar  Glycine max  Gossypium hirsutum  Helianthus argophyllus  Helianthus paradoxus  Hordeum vulgare  Lactuca sativa  Lotus corniculatus  Medicago truncatula  Nicotiana tabacum  Nuphar advena  Oryza sativa  Panicum virgatum  Petunia x.hybrida  Physcomitrella patens  Picea glauca  Pinus taeda  Populus alba  Populus euphratica  Populus trichocarpa  Prunus persica  Saccharum officinarum  Salvia miltiorrhiza  Saruma henryi  Solanum tuberosum  Sorghum propinquum  Theobroma cacao  Tortula ruralis  Triticum aestivum  Vitis vinifera  Welwitschia mirabilis  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Allium cepa (onion)  ( Select Species     Clear Species)
  acep14757 CF4394778
  acep21706 TC34535
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha101214 At1g111001
  atha101251 At5g051302
  atha104655 At1g504101
  atha106100 At5g435301
  atha82802 At3g166001
  atha83264 At1g611401
  atha84219 At3g200101
  atha85837 At5g227501
Brassica napus (rapeseed)  ( Select Species     Clear Species)
  bnap15231 Bna.18921
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb6656 3308561
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax72968 Gma.32391
  gmax82194 Gma.76921
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir54550 TC355541
Helianthus argophyllus ()  ( Select Species     Clear Species)
  harg1006 S_CF0887682
Helianthus paradoxus ()  ( Select Species     Clear Species)
  hpar2757 S_CF0762361
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul58310 Hv.109781
  hvul59271 Hv.72661
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat48654 Lsa.47322
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor10634 Lco.34871
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru93288 TC1036091
  mtru97175 BG5840272
Nicotiana tabacum (common tobacco)  ( Select Species     Clear Species)
  nrus8959 BP5326511
Nuphar advena ()  ( Select Species     Clear Species)
  nadv4718 3586161
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat142504 5755.m00087 Protein sequence may be in error1
  osat145095 Os04g537201
  osat147998 Os07g448002
  osat149524 4282.m00161 Protein sequence may be in error1
  osat150357 3061.m00332 Protein sequence may be in error4
  osat152639 Os01g723107
  osat164676 6101.m00137 Protein sequence may be in error1
  osat176941 Os07g327301
  osat199130 Os08g082203
  osat204726 Os01g571101
  osat212460 3849.m00136 Protein sequence may be in error1
Panicum virgatum (switchgrass)  ( Select Species     Clear Species)
  pvir3486 C_DN1525571
Petunia x.hybrida (petunia)  ( Select Species     Clear Species)
  phyb1635 S_CV2945101
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat25559 Ppa.29001
  ppat25582 Ppa.29371
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla9074 CO2396622
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae31853 TC627921
  ptae45168 DR1780422
  ptae49917 TC779351
Populus alba (white poplar)  ( Select Species     Clear Species)
  palb4264 S_CF2362681
  palb8188 S_CF236268.11k1
Populus euphratica ()  ( Select Species     Clear Species)
  peup2645 S_AJ7751171
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc10587 PUT-148a-Populus_trichocarpa-185862
  ptrc17908 PUT-148a-Populus_trichocarpa_x_Populus_nigra-30621
Prunus persica (peach)  ( Select Species     Clear Species)
  pers9893 C_BU0454421
Saccharum officinarum (sugar cane)  ( Select Species     Clear Species)
  soff3404 Sof.43421
Salvia miltiorrhiza (redroot sage)  ( Select Species     Clear Species)
  smil3981 S_CV1631591
Saruma henryi ()  ( Select Species     Clear Species)
  shen4720 3124126
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub45423 Stu.167521
  stub46156 Stu.164141
Sorghum propinquum ()  ( Select Species     Clear Species)
  spro5490 C_BF4809321
Theobroma cacao (cocoa)  ( Select Species     Clear Species)
  tcac5125 TheobromacacaoTUC04-08-18.4752
Tortula ruralis ()  ( Select Species     Clear Species)
  trur182 S_CN2021081
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes128014 Ta.161211
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin27227 Vvi.55991
  vvin28417 Vvi.88211
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir2489 3495781
Zea mays (corn)  ( Select Species     Clear Species)
  zmay61744 Zm.165201
  zmay63720 Zm.63182
  zmay70376 Zm.64791
  zmay74565 Zm.263261
Subfamily
1  2  3  4  5  6  7  8  

Subfamily ID: 1

SEQUENCE: atha101214 LENGTH: 1226 aa
IPR000330
SNF2-related
PF00176 [545-885]T 3.7e-51 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [1090-1168]T 8.9e-27 PF00271 Helicase_C Helicase_C
SM00490 [1085-1168]T 2.9e-19 SM00490 no description no description
IPR001841
Zinc finger, RING-type
PF00097 [919-959]T 0.0018 PF00097 zf-C3HC4 zf-C3HC4
PS00518 [934-943]T 8e-5 PS00518 ZF_RING_1 ZF_RING_1
PS50089 [919-956]T 10.129 PS50089 ZF_RING_2 ZF_RING_2
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [538-784]T 1.3e-25 SM00487 no description no description
no IPR
PTHR10799 [418-470]T 1.9e-250 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[510-592]T 1.9e-250 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[632-886]T 1.9e-250 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[921-943]T 1.9e-250 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[1063-1224]T 1.9e-250 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF62 [418-470]T 1.9e-250 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[510-592]T 1.9e-250 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[632-886]T 1.9e-250 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[921-943]T 1.9e-250 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[1063-1224]T 1.9e-250 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16 DNA REPAIR HELICASE RAD5,16
SSF52540 [515-764]T 6.8e-17 SSF52540 P-loop containing nucleoside triphosphate hydrolases[1071-1205]T 4.6e-27 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases
SSF57850 [906-981]T 1.8e-10 SSF57850 RING/U-box RING/U-box

Subfamily ID: 2

SEQUENCE: atha101251 LENGTH: 862 aa
IPR000330
SNF2-related
PF00176 [215-576]T 8.5e-55 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [725-805]T 5.3e-25 PF00271 Helicase_C Helicase_C
SM00490 [720-805]T 1.4e-16 SM00490 no description no description
IPR001841
Zinc finger, RING-type
PF00097 [616-654]T 3.3e-05 PF00097 zf-C3HC4 zf-C3HC4
PS00518 [631-640]T 8e-5 PS00518 ZF_RING_1 ZF_RING_1
PS50089 [616-655]T 12.238 PS50089 ZF_RING_2 ZF_RING_2
SM00184 [616-654]T 1.7e-05 SM00184 no description no description
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [208-474]T 1.8e-25 SM00487 no description no description
no IPR
PTHR10799 [49-77]T 1.6e-295 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[179-228]T 1.6e-295 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[258-288]T 1.6e-295 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[338-579]T 1.6e-295 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[618-640]T 1.6e-295 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[697-861]T 1.6e-295 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF61 [49-77]T 1.6e-295 PTHR10799:SF61 HELICASE SMARCA3[179-228]T 1.6e-295 PTHR10799:SF61 HELICASE SMARCA3[258-288]T 1.6e-295 PTHR10799:SF61 HELICASE SMARCA3[338-579]T 1.6e-295 PTHR10799:SF61 HELICASE SMARCA3[618-640]T 1.6e-295 PTHR10799:SF61 HELICASE SMARCA3[697-861]T 1.6e-295 PTHR10799:SF61 HELICASE SMARCA3 HELICASE SMARCA3
SSF52540 [259-860]T 3.1e-28 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 3

SEQUENCE: osat199130 LENGTH: 1254 aa
IPR000330
SNF2-related
PF00176 [442-876]T 8.3e-56 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [1117-1195]T 5e-24 PF00271 Helicase_C Helicase_C
SM00490 [1112-1195]T 3.4e-17 SM00490 no description no description
IPR001841
Zinc finger, RING-type
PS00518 [992-1001]T 8e-5 PS00518 ZF_RING_1 ZF_RING_1
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [435-779]T 1.1e-26 SM00487 no description no description
no IPR
DOMAIN [965-1253]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
PTHR10799 [155-189]T 3.1e-252 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[348-363]T 3.1e-252 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[423-489]T 3.1e-252 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[585-648]T 3.1e-252 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[698-877]T 3.1e-252 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[979-1001]T 3.1e-252 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[1089-1251]T 3.1e-252 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF62 [155-189]T 3.1e-252 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[348-363]T 3.1e-252 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[423-489]T 3.1e-252 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[585-648]T 3.1e-252 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[698-877]T 3.1e-252 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[979-1001]T 3.1e-252 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[1089-1251]T 3.1e-252 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16 DNA REPAIR HELICASE RAD5,16
SSF52540 [394-1217]T 3.3e-25 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases
TRANSMEM [945-964]T TRANSMEM TRANSMEM TRANSMEM

Subfamily ID: 4

SEQUENCE: osat150357 LENGTH: 1031 aa
IPR000330
SNF2-related
PF00176 [283-717]T 1.9000000000000001E-53 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [894-972]T 9.1E-18 PF00271 Helicase_C Helicase_C
SM00490 [889-972]T 3.4E-17 SM00490 HELICc HELICc
IPR001841
Zinc finger, RING-type
PF00097 [754-794]T 0.13 PF00097 zf-C3HC4 zf-C3HC4
PS00518 [769-778]T 0.0 PS00518 ZF_RING_1 ZF_RING_1
PS50089 [754-790]T 10.896 PS50089 ZF_RING_2 ZF_RING_2
SM00184 [754-794]T 1.4E-4 SM00184 RING RING
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [276-620]T 1.1E-26 SM00487 DEXDc DEXDc

Subfamily ID: 5

SEQUENCE: acep21706 LENGTH: 273 aa
IPR001650
Helicase, C-terminal
PF00271 [140-218]T 1.2e-24 PF00271 Helicase_C Helicase_C
SM00490 [135-218]T 5.2e-17 SM00490 no description no description
IPR001841
Zinc finger, RING-type
PF00097 [1-39]T 0.0022 PF00097 zf-C3HC4 zf-C3HC4
PS00518 [14-23]T 8e-5 PS00518 ZF_RING_1 ZF_RING_1
PS50089 [1-35]T 9.303 PS50089 ZF_RING_2 ZF_RING_2
no IPR
PTHR10799 [1-23]T 9.6e-87 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED[112-273]T 9.6e-87 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF62 [1-23]T 9.6e-87 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16[112-273]T 9.6e-87 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16 DNA REPAIR HELICASE RAD5,16
SSF52540 [123-256]T 1.9e-23 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases
SSF57850 [1-55]T 2.2e-09 SSF57850 RING/U-box RING/U-box

Subfamily ID: 6

SEQUENCE: shen4720 LENGTH: 252 aa
IPR000330
SNF2-related
PF00176 [4-96]T 2.6e-08 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [177-252]T 7.5e-13 PF00271 Helicase_C Helicase_C
SM00490 [171-252]T 9.8e-10 SM00490 no description no description
no IPR
PTHR10799 [1-252]T 6.2e-139 PTHR10799 DNA REPAIR PROTEIN RAD16-RELATED DNA REPAIR PROTEIN RAD16-RELATED
PTHR10799:SF27 [1-252]T 6.2e-139 PTHR10799:SF27 TRANSCRIPTION FACTOR RUSH-1ALPHA-RELATED TRANSCRIPTION FACTOR RUSH-1ALPHA-RELATED
SSF52540 [157-252]T 7.3e-19 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases

Subfamily ID: 7

SEQUENCE: osat152639 LENGTH: 1299 aa
IPR000330
SNF2-related
PF00176 [696-807]T 5.1E-13 PF00176 SNF2_N SNF2_N
IPR001650
Helicase, C-terminal
PF00271 [1145-1222]T 7.1E-8 PF00271 Helicase_C Helicase_C
SM00490 [1140-1222]T 1.7E-6 SM00490 HELICc HELICc
IPR001810
Cyclin-like F-box
PF00646 [236-281]T 0.6 PF00646 F-box F-box
PS50181 [233-269]T 9.842 PS50181 FBOX FBOX
IPR001841
Zinc finger, RING-type
PS00518 [1003-1012]? 0.0 PS00518 ZF_RING_1 ZF_RING_1
IPR011124
Zinc finger, CW-type
PF07496 [511-557]T 9.4E-13 PF07496 zf-CW zf-CW
PS51050 [507-558]T 13.634 PS51050 ZF_CW ZF_CW
IPR011545
DEAD/DEAH box helicase, N-terminal
SM00487 [277-836]T 1.3E-11 SM00487 DEXDc DEXDc
no IPR
DOMAIN [1202-1298]T DOMAIN DOMAIN CYTOPLASMIC. DOMAIN CYTOPLASMIC.
TRANSMEM [1179-1201]T TRANSMEM TRANSMEM TRANSMEM

Subfamily ID: 8

SEQUENCE: acep14757 LENGTH: 116 aa
IPR001410
DEAD/DEAH box helicase
PS50136 [1-107]T 8.764 PS50136 HELICASE HELICASE
IPR001650
Helicase, C-terminal
PF00271 [19-97]T 1.4e-28 PF00271 Helicase_C Helicase_C
SM00490 [14-97]T 3.7e-20 SM00490 no description no description
no IPR
PTHR10799 [1-116]T 1.6e-67 PTHR10799 ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED
PTHR10799:SF62 [1-116]T 1.6e-67 PTHR10799:SF62 DNA REPAIR HELICASE RAD5,16 DNA REPAIR HELICASE RAD5,16
SSF52540 [1-107]T 1.3e-22 SSF52540 P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases
Subfamily
1  2  3  4  5  6  7  8  

Sub family ID: 0
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
 
Sub family ID: 1
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR001841: Zn-finger, RING
Biological ProcessGO:0016567, protein ubiquitination
Cellular ComponentGO:0000151, ubiquitin ligase complex
Molecular FunctionGO:0004842, ubiquitin-protein ligase activity
GO:0008270, zinc ion binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 2
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR001841: Zn-finger, RING
Biological ProcessGO:0016567, protein ubiquitination
Cellular ComponentGO:0000151, ubiquitin ligase complex
Molecular FunctionGO:0004842, ubiquitin-protein ligase activity
GO:0008270, zinc ion binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 3
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR001841: Zn-finger, RING
Biological ProcessGO:0016567, protein ubiquitination
Cellular ComponentGO:0000151, ubiquitin ligase complex
Molecular FunctionGO:0004842, ubiquitin-protein ligase activity
GO:0008270, zinc ion binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 4
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR001841: Zn-finger, RING
Biological ProcessGO:0016567, protein ubiquitination
Cellular ComponentGO:0000151, ubiquitin ligase complex
Molecular FunctionGO:0004842, ubiquitin-protein ligase activity
GO:0008270, zinc ion binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 5
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR001841: Zn-finger, RING
Biological ProcessGO:0016567, protein ubiquitination
Cellular ComponentGO:0000151, ubiquitin ligase complex
Molecular FunctionGO:0004842, ubiquitin-protein ligase activity
GO:0008270, zinc ion binding
 
Sub family ID: 6
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 7
IPR000330: SNF2-related
Molecular FunctionGO:0003677, DNA binding
GO:0005524, ATP binding
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
IPR001841: Zn-finger, RING
Biological ProcessGO:0016567, protein ubiquitination
Cellular ComponentGO:0000151, ubiquitin ligase complex
Molecular FunctionGO:0004842, ubiquitin-protein ligase activity
GO:0008270, zinc ion binding
IPR011124: CW-type Zn-finger
Molecular FunctionGO:0008270, zinc ion binding
IPR011545: DEAD/DEAH box helicase, N-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Sub family ID: 8
IPR001410: DEAD/DEAH box helicase
Molecular FunctionGO:0005524, ATP binding
GO:0008026, ATP-dependent helicase activity
IPR001650: Helicase, C-terminal
Molecular FunctionGO:0003676, nucleic acid binding
GO:0004386, helicase activity
GO:0005524, ATP binding
 
Department of Biology | University of North Carolina at Chapel Hill
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