Search results for family: 9264, total 21 Unipeptides retrieved.


Related families
Excluded Unipeptides View
Thumbnail sketch of subfamilies
 no tree available
Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

View results sorted by

Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
amaj3657  interProC_AJ795302Antirrhinum majus (snapdragon) 
gmax72894 Gma.13289Glycine max (soybean) 
garb3282 S_BF278107Gossypium arboreum (tree cotton) 
inil538 S_BJ554971Ipomoea nil (qian niu) 
mtru82187 TC97179Medicago truncatula (barrel medic) 
pgla13508 CO485312Picea glauca (white spruce) 
pgla13665 TC1347Picea glauca (white spruce) 
ptae32277 TC61266Pinus taeda (loblolly pine) 
ptae45993 TC61265Pinus taeda (loblolly pine) 
ptae59073 DR081412Pinus taeda (loblolly pine) 
sreb3945 S_BG524678Stevia rebaudiana (stevia) 
zele10939 PUT-148a-Zinnia_elegans-4955Zinnia elegans (zinnia) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
acep16117  interProCF439734Allium cepa (onion) 
atha104973 At1g60990Arabidopsis thaliana (thale cress) 
gsoj5321 PUT-148a-Glycine_soja-8162Glycine soja (wild soybean) 
ghir57371 TC31074Gossypium hirsutum (cotton (tetraploid)) 
lesc67133 Les.4606Lycopersicon esculentum (tomato) 
mtru74900 AW256984Medicago truncatula (barrel medic) 
ptri139 C_CD574419Poncirus trifoliata () 
stub46208 Stu.4459Solanum tuberosum (potato) 
wmir4029 351644Welwitschia mirabilis () 
Species
Allium cepa  Antirrhinum majus  Arabidopsis thaliana  Glycine max  Glycine soja  Gossypium arboreum  Gossypium hirsutum  Ipomoea nil  Lycopersicon esculentum  Medicago truncatula  Picea glauca  Pinus taeda  Poncirus trifoliata  Solanum tuberosum  Stevia rebaudiana  Welwitschia mirabilis  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Allium cepa (onion)  ( Select Species     Clear Species)
  acep16117 CF4397342
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj3657 C_AJ7953021
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha104973 At1g609902
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax72894 Gma.132891
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj5321 PUT-148a-Glycine_soja-81622
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb3282 S_BF2781071
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir57371 TC310742
Ipomoea nil (qian niu)  ( Select Species     Clear Species)
  inil538 S_BJ5549711
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc67133 Les.46062
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru74900 AW2569842
  mtru82187 TC971791
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla13508 CO4853121
  pgla13665 TC13471
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae32277 TC612661
  ptae45993 TC612651
  ptae59073 DR0814121
Poncirus trifoliata ()  ( Select Species     Clear Species)
  ptri139 C_CD5744192
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub46208 Stu.44592
Stevia rebaudiana (stevia)  ( Select Species     Clear Species)
  sreb3945 S_BG5246781
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir4029 3516442
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele10939 PUT-148a-Zinnia_elegans-49551
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: amaj3657 LENGTH: 185 aa
IPR006222
Glycine cleavage T protein (aminomethyl transferase)
PF01571 [47-160]T 1.3e-05 PF01571 GCV_T GCV_T
no IPR
PTHR13847 [30-185]T 1.6e-79 PTHR13847 FAD NAD BINDING OXIDOREDUCTASES FAD NAD BINDING OXIDOREDUCTASES
PTHR13847:SF3 [30-185]T 1.6e-79 PTHR13847:SF3 FAD OXIDOREDUCTASE FAD OXIDOREDUCTASE

Subfamily ID: 2

SEQUENCE: acep16117 LENGTH: 245 aa
IPR006222
Glycine cleavage T protein (aminomethyl transferase)
PF01571 [1-245]T 2.9e-05 PF01571 GCV_T GCV_T
no IPR
PTHR13847 [1-245]T 4.1e-110 PTHR13847 FAD NAD BINDING OXIDOREDUCTASES FAD NAD BINDING OXIDOREDUCTASES
PTHR13847:SF3 [1-245]T 4.1e-110 PTHR13847:SF3 FAD OXIDOREDUCTASE FAD OXIDOREDUCTASE
Subfamily
1  2  

Sub family ID: 1
IPR006222: Glycine cleavage T protein (aminomethyl transferase)
Biological ProcessGO:0006546, glycine catabolism
Cellular ComponentGO:0005737, cytoplasm
Molecular FunctionGO:0004047, aminomethyltransferase activity
 
Sub family ID: 2
IPR006222: Glycine cleavage T protein (aminomethyl transferase)
Biological ProcessGO:0006546, glycine catabolism
Cellular ComponentGO:0005737, cytoplasm
Molecular FunctionGO:0004047, aminomethyltransferase activity
 
Department of Biology | University of North Carolina at Chapel Hill
Comments / Questions