Search results for family: 931, total 90 Unipeptides retrieved.


Related families 3 families found.
Excluded Unipeptides View
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Select Unipeptides in panel below to see alignment and detailed phylogeny
Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  3  4  5  6  7  8  9  10  11  12  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
aame2124  interPro281826Acorus americanus (sweetflag) 
atri6860 196805Amborella trichopoda (amborella) 
atha101660 At3g54190Arabidopsis thaliana (thale cress) 
atha99618 At2g38630Arabidopsis thaliana (thale cress) 
aoff2108 227299Asparagus officinalis (garden asparagus) 
asat818 PUT-148a-Avena_sativa-718Avena sativa (oat) 
amar999 S_BM497504Avicennia marina () 
cann20917 CA522688Capsicum annuum (pepper) 
csin9443 Csi.5697Citrus sinensis (orange) 
gsoj104 PUT-148a-Glycine_soja-159Glycine soja (wild soybean) 
hpar984 S_CF078055Helianthus paradoxus () 
hvul58068 Hv.9417Hordeum vulgare (barley) 
hvul59436 Hv.11621Hordeum vulgare (barley) 
jreg986 S_CV196814Juglans regia (English walnut) 
lesc68396 Les.8473Lycopersicon esculentum (tomato) 
mdom422 Mdo.548Malus x.domestica (apple) 
mtru85491 TC96390Medicago truncatula (barrel medic) 
mtru91744 TC95459Medicago truncatula (barrel medic) 
mtru99797 TC94980Medicago truncatula (barrel medic) 
osat137394 Os02g54090Oryza sativa (rice) 
osat173896 Os12g31440Oryza sativa (rice) 
osat173999 Os05g40410Oryza sativa (rice) 
osat187478 Os01g60200Oryza sativa (rice) 
osat213440 Os02g06460Oryza sativa (rice) 
pame3930 210191Persea americana (avocado) 
pgla8553 TC2498Picea glauca (white spruce) 
ptae33259 TC69014Pinus taeda (loblolly pine) 
ptae33316 TC67988Pinus taeda (loblolly pine) 
peur2876 C_CX178957Populus euramericana () 
pers10355 S_AJ827137Prunus persica (peach) 
soff3063 Sof.3937Saccharum officinarum (sugar cane) 
stub38064 Stu.6809Solanum tuberosum (potato) 
sorg44448 Sbi.6350Sorghum bicolor (sorghum) 
spro6510 C_BG050625Sorghum propinquum () 
taes124369 Ta.8243Triticum aestivum (bread wheat) 
taes130596 Ta.26748Triticum aestivum (bread wheat) 
taes133763 Ta.23336Triticum aestivum (bread wheat) 
taes138925 Ta.34510Triticum aestivum (bread wheat) 
taes150778 Ta.7270Triticum aestivum (bread wheat) 
tmon1281 PUT-148a-Triticum_monococcum-1857Triticum monococcum (einkorn wheat) 
tmon2344 PUT-148a-Triticum_monococcum-3479Triticum monococcum (einkorn wheat) 
zmay59578 Zm.17817Zea mays (corn) 
zmay63664 Zm.3436Zea mays (corn) 
zmay67117 Zm.22681Zea mays (corn) 
zmay68557 Zm.19618Zea mays (corn) 
zmay76837 Zm.19939Zea mays (corn) 
zele11776 PUT-148a-Zinnia_elegans-6368Zinnia elegans (zinnia) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
acep16672  interProTC268Allium cepa (onion) 
gmax79321 Gma.16657Glycine max (soybean) 
gmax85949 Gma.10781Glycine max (soybean) 
gsoj6746 PUT-148a-Glycine_soja-1810083Glycine soja (wild soybean) 
ghir64986 CO132735Gossypium hirsutum (cotton (tetraploid)) 
hvul58383 Hv.9279Hordeum vulgare (barley) 
inil1580 C_BJ569434Ipomoea nil (qian niu) 
jreg9 S_CV198185Juglans regia (English walnut) 
lsat50294 Lsa.6418Lactuca sativa (lettuce) 
lesc65683 Les.7201Lycopersicon esculentum (tomato) 
mesc4068 C_CK644908Manihot esculenta (cassava) 
pers9389 S_BU048959Prunus persica (peach) 
stub44619 Stu.14276Solanum tuberosum (potato) 
sorg45832 Sbi.8128Sorghum bicolor (sorghum) 
spro5988 C_BG103033Sorghum propinquum () 
vcor440 294632Vaccinium corymbosum (American blueberry) 
Subfamily ID: 3( Select Subfamily     Clear Subfamily)
ccle515  interProPUT-148a-Citrus_clementina-764Citrus clementina () 
inil1232 S_BJ553505Ipomoea nil (qian niu) 
mtru86439 TC98737Medicago truncatula (barrel medic) 
nadv5097 354052Nuphar advena () 
pcoc11597 S_CA911336Phaseolus coccineus () 
pvul1156 PUT-148a-Phaseolus_vulgaris-1492Phaseolus vulgaris (common bean) 
vshu2484 S_CV097787Vitis shuttleworthii (calloose grape) 
Subfamily ID: 4( Select Subfamily     Clear Subfamily)
ccle2404 PUT-148a-Citrus_clementina-3555Citrus clementina () 
mtru75335 TC94981Medicago truncatula (barrel medic) 
sorg44999 Sbi.7103Sorghum bicolor (sorghum) 
vaes336 S_CF355326Vitis aestivalis () 
wmir4430 352227Welwitschia mirabilis () 
Subfamily ID: 5( Select Subfamily     Clear Subfamily)
lesc65234  interProLes.5749Lycopersicon esculentum (tomato) 
pers5408 C_BU042101Prunus persica (peach) 
vshu2175 S_CV096592Vitis shuttleworthii (calloose grape) 
vvin23304 Vvi.226Vitis vinifera (wine grape) 
Subfamily ID: 6( Select Subfamily     Clear Subfamily)
amaj5143  interProS_AJ801258Antirrhinum majus (snapdragon) 
pcoc9265 S_CA913133Phaseolus coccineus () 
pvul5703 PUT-148a-Phaseolus_vulgaris-7342Phaseolus vulgaris (common bean) 
Subfamily ID: 7( Select Subfamily     Clear Subfamily)
ggne378  interProS_CB082032Gnetum gnemon () 
ttur794 S_AJ614433.8kTriticum turgidum (poulard wheat) 
Subfamily ID: 8( Select Subfamily     Clear Subfamily)
amar516  interProS_BM172958Avicennia marina () 
inil6029 S_BJ564547Ipomoea nil (qian niu) 
Subfamily ID: 9( Select Subfamily     Clear Subfamily)
ghir52690  interProCO132734Gossypium hirsutum (cotton (tetraploid)) 
Subfamily ID: 10( Select Subfamily     Clear Subfamily)
mcry20345  interProBG268811Mesembryanthemum crystallinum (iceplant) 
Subfamily ID: 11( Select Subfamily     Clear Subfamily)
msat1344  interProS_CO511941Medicago sativa (alfalfa) 
Subfamily ID: 12( Select Subfamily     Clear Subfamily)
mgut4601  interProMgU958Mimulus guttatus (spotted monkey flower) 
Species
Acorus americanus  Allium cepa  Amborella trichopoda  Antirrhinum majus  Arabidopsis thaliana  Asparagus officinalis  Avena sativa  Avicennia marina  Capsicum annuum  Citrus clementina  Citrus sinensis  Glycine max  Glycine soja  Gnetum gnemon  Gossypium hirsutum  Helianthus paradoxus  Hordeum vulgare  Ipomoea nil  Juglans regia  Lactuca sativa  Lycopersicon esculentum  Malus x.domestica  Manihot esculenta  Medicago sativa  Medicago truncatula  Mesembryanthemum crystallinum  Mimulus guttatus  Nuphar advena  Oryza sativa  Persea americana  Phaseolus coccineus  Phaseolus vulgaris  Picea glauca  Pinus taeda  Populus euramericana  Prunus persica  Saccharum officinarum  Solanum tuberosum  Sorghum bicolor  Sorghum propinquum  Triticum aestivum  Triticum monococcum  Triticum turgidum  Vaccinium corymbosum  Vitis aestivalis  Vitis shuttleworthii  Vitis vinifera  Welwitschia mirabilis  Zea mays  Zinnia elegans  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Acorus americanus (sweetflag)  ( Select Species     Clear Species)
  aame2124 2818261
Allium cepa (onion)  ( Select Species     Clear Species)
  acep16672 TC2682
Amborella trichopoda (amborella)  ( Select Species     Clear Species)
  atri6860 1968051
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj5143 S_AJ8012586
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha101660 At3g541901
  atha99618 At2g386301
Asparagus officinalis (garden asparagus)  ( Select Species     Clear Species)
  aoff2108 2272991
Avena sativa (oat)  ( Select Species     Clear Species)
  asat818 PUT-148a-Avena_sativa-7181
Avicennia marina ()  ( Select Species     Clear Species)
  amar516 S_BM1729588
  amar999 S_BM4975041
Capsicum annuum (pepper)  ( Select Species     Clear Species)
  cann20917 CA5226881
Citrus clementina ()  ( Select Species     Clear Species)
  ccle2404 PUT-148a-Citrus_clementina-35554
  ccle515 PUT-148a-Citrus_clementina-7643
Citrus sinensis (orange)  ( Select Species     Clear Species)
  csin9443 Csi.56971
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax79321 Gma.166572
  gmax85949 Gma.107812
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj104 PUT-148a-Glycine_soja-1591
  gsoj6746 PUT-148a-Glycine_soja-18100832
Gnetum gnemon ()  ( Select Species     Clear Species)
  ggne378 S_CB0820327
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir52690 CO1327349
  ghir64986 CO1327352
Helianthus paradoxus ()  ( Select Species     Clear Species)
  hpar984 S_CF0780551
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul58068 Hv.94171
  hvul58383 Hv.92792
  hvul59436 Hv.116211
Ipomoea nil (qian niu)  ( Select Species     Clear Species)
  inil1232 S_BJ5535053
  inil1580 C_BJ5694342
  inil6029 S_BJ5645478
Juglans regia (English walnut)  ( Select Species     Clear Species)
  jreg9 S_CV1981852
  jreg986 S_CV1968141
Lactuca sativa (lettuce)  ( Select Species     Clear Species)
  lsat50294 Lsa.64182
Lycopersicon esculentum (tomato)  ( Select Species     Clear Species)
  lesc65234 Les.57495
  lesc65683 Les.72012
  lesc68396 Les.84731
Malus x.domestica (apple)  ( Select Species     Clear Species)
  mdom422 Mdo.5481
Manihot esculenta (cassava)  ( Select Species     Clear Species)
  mesc4068 C_CK6449082
Medicago sativa (alfalfa)  ( Select Species     Clear Species)
  msat1344 S_CO51194111
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru75335 TC949814
  mtru85491 TC963901
  mtru86439 TC987373
  mtru91744 TC954591
  mtru99797 TC949801
Mesembryanthemum crystallinum (iceplant)  ( Select Species     Clear Species)
  mcry20345 BG26881110
Mimulus guttatus (spotted monkey flower)  ( Select Species     Clear Species)
  mgut4601 MgU95812
Nuphar advena ()  ( Select Species     Clear Species)
  nadv5097 3540523
Oryza sativa (rice)  ( Select Species     Clear Species)
  osat137394 Os02g540901
  osat173896 Os12g314401
  osat173999 Os05g404101
  osat187478 Os01g602001
  osat213440 Os02g064601
Persea americana (avocado)  ( Select Species     Clear Species)
  pame3930 2101911
Phaseolus coccineus ()  ( Select Species     Clear Species)
  pcoc11597 S_CA9113363
  pcoc9265 S_CA9131336
Phaseolus vulgaris (common bean)  ( Select Species     Clear Species)
  pvul1156 PUT-148a-Phaseolus_vulgaris-14923
  pvul5703 PUT-148a-Phaseolus_vulgaris-73426
Picea glauca (white spruce)  ( Select Species     Clear Species)
  pgla8553 TC24981
Pinus taeda (loblolly pine)  ( Select Species     Clear Species)
  ptae33259 TC690141
  ptae33316 TC679881
Populus euramericana ()  ( Select Species     Clear Species)
  peur2876 C_CX1789571
Prunus persica (peach)  ( Select Species     Clear Species)
  pers10355 S_AJ8271371
  pers5408 C_BU0421015
  pers9389 S_BU0489592
Saccharum officinarum (sugar cane)  ( Select Species     Clear Species)
  soff3063 Sof.39371
Solanum tuberosum (potato)  ( Select Species     Clear Species)
  stub38064 Stu.68091
  stub44619 Stu.142762
Sorghum bicolor (sorghum)  ( Select Species     Clear Species)
  sorg44448 Sbi.63501
  sorg44999 Sbi.71034
  sorg45832 Sbi.81282
Sorghum propinquum ()  ( Select Species     Clear Species)
  spro5988 C_BG1030332
  spro6510 C_BG0506251
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes124369 Ta.82431
  taes130596 Ta.267481
  taes133763 Ta.233361
  taes138925 Ta.345101
  taes150778 Ta.72701
Triticum monococcum (einkorn wheat)  ( Select Species     Clear Species)
  tmon1281 PUT-148a-Triticum_monococcum-18571
  tmon2344 PUT-148a-Triticum_monococcum-34791
Triticum turgidum (poulard wheat)  ( Select Species     Clear Species)
  ttur794 S_AJ614433.8k7
Vaccinium corymbosum (American blueberry)  ( Select Species     Clear Species)
  vcor440 2946322
Vitis aestivalis ()  ( Select Species     Clear Species)
  vaes336 S_CF3553264
Vitis shuttleworthii (calloose grape)  ( Select Species     Clear Species)
  vshu2175 S_CV0965925
  vshu2484 S_CV0977873
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin23304 Vvi.2265
Welwitschia mirabilis ()  ( Select Species     Clear Species)
  wmir4430 3522274
Zea mays (corn)  ( Select Species     Clear Species)
  zmay59578 Zm.178171
  zmay63664 Zm.34361
  zmay67117 Zm.226811
  zmay68557 Zm.196181
  zmay76837 Zm.199391
Zinnia elegans (zinnia)  ( Select Species     Clear Species)
  zele11776 PUT-148a-Zinnia_elegans-63681
Subfamily
1  2  3  4  5  6  7  8  9  10  11  12  

Subfamily ID: 1

SEQUENCE: aame2124 LENGTH: 149 aa
IPR001680
WD-40 repeat
PS00678 [9-23]? NA PS00678 WD_REPEATS_1 WD_REPEATS_1
IPR011046
WD40-like
SSF50978 [6-148]T 9.1e-07 SSF50978 WD40-repeat WD40-repeat

Subfamily ID: 2

SEQUENCE: acep16672 LENGTH: 294 aa
IPR011046
WD40-like
SSF50978 [43-272]T 0.0011 SSF50978 WD40-repeat WD40-repeat

Subfamily ID: 3

SEQUENCE: ccle515 LENGTH: 119 aa
IPR011047
Quinonprotein alcohol dehydrogenase-like
SSF50998 [29-118]T 0.0037 SSF50998 Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like

Subfamily ID: 4

No Results.

Subfamily ID: 5

SEQUENCE: lesc65234 LENGTH: 478 aa
IPR001680
WD-40 repeat
PS00678 [327-341]? NA PS00678 WD_REPEATS_1 WD_REPEATS_1
IPR011046
WD40-like
SSF50978 [1-477]T 7.1e-16 SSF50978 WD40-repeat WD40-repeat

Subfamily ID: 6

SEQUENCE: amaj5143 LENGTH: 149 aa
IPR011048
Cytochrome cd1-nitrite reductase-like, C-terminal haem d1
SSF51004 [6-148]T 1.2e-05 SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
IPR013032
EGF-like region
PS00022 [90-101]? NA PS00022 EGF_1 EGF_1

Subfamily ID: 7

SEQUENCE: ggne378 LENGTH: 144 aa
IPR001680
WD-40 repeat
PS00678 [105-119]? NA PS00678 WD_REPEATS_1 WD_REPEATS_1
IPR011048
Cytochrome cd1-nitrite reductase-like, C-terminal haem d1
SSF51004 [17-139]T 0.00049 SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase

Subfamily ID: 8

SEQUENCE: amar516 LENGTH: 98 aa
IPR011048
Cytochrome cd1-nitrite reductase-like, C-terminal haem d1
SSF51004 [8-97]T 0.0017 SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase

Subfamily ID: 9

SEQUENCE: ghir52690 LENGTH: 132 aa
IPR011047
Quinonprotein alcohol dehydrogenase-like
SSF50998 [9-131]T 0.0021 SSF50998 Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like

Subfamily ID: 10

SEQUENCE: mcry20345 LENGTH: 141 aa
IPR011048
Cytochrome cd1-nitrite reductase-like, C-terminal haem d1
SSF51004 [1-140]T 0.00017 SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase

Subfamily ID: 11

SEQUENCE: msat1344 LENGTH: 104 aa
IPR011046
WD40-like
SSF50978 [14-104]T 0.0037 SSF50978 WD40-repeat WD40-repeat

Subfamily ID: 12

SEQUENCE: mgut4601 LENGTH: 108 aa
IPR013032
EGF-like region
PS00022 [49-60]? NA PS00022 EGF_1 EGF_1
no IPR
SSF63829 [16-108]T 0.0083 SSF63829 Diisopropylfluorophosphatase (phosphotriesterase, DFP) Diisopropylfluorophosphatase (phosphotriesterase, DFP)
Subfamily
1  2  3  4  5  6  7  8  9  10  11  12  

No Results.
 
Department of Biology | University of North Carolina at Chapel Hill
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