Search results for family: 9557, total 21 Unipeptides retrieved.


Related families 2 families found.
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Symbol Key = similarity to MITE sequence
= similarity to transposon sequence
= similarity to retrotransposon sequence
= similarity to other repeat sequence
 
= not found in mitochondrial proteome
= found in mitochondrial proteome
= not found in plastid proteome
= found in plastid proteome
 

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Subfamily
1  2  

Select members and view reduced alignment. and phylogenetic tree .
Unipeptide ID Alias Species
Subfamily ID: 1( Select Subfamily     Clear Subfamily)
amaj4845 S_AJ801182Antirrhinum majus (snapdragon) 
atha94225 At3g08840Arabidopsis thaliana (thale cress) 
ccle3223 PUT-148a-Citrus_clementina-4750Citrus clementina () 
ghyb1812 324396Gerbera hybrid.cultivar () 
gmax76594 Gma.10514Glycine max (soybean) 
gsoj1669 PUT-148a-Glycine_soja-2602Glycine soja (wild soybean) 
garb9480 S_BQ409973Gossypium arboreum (tree cotton) 
ghir57800 BQ409973Gossypium hirsutum (cotton (tetraploid)) 
lcor13712 Lco.7324Lotus corniculatus (lotus) 
mdom1560  interProMdo.2060Malus x.domestica (apple) 
mtru75825 TC96194Medicago truncatula (barrel medic) 
ppat27106 Ppa.4913Physcomitrella patens () 
ptrc11176 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-12714Populus trichocarpa (western balsam poplar) 
vvin30423 Vvi.11830Vitis vinifera (wine grape) 
zmay56795 Zm.8600Zea mays (corn) 
Subfamily ID: 2( Select Subfamily     Clear Subfamily)
hvul53432  interProHv.10749Hordeum vulgare (barley) 
mtru74435 TC95631Medicago truncatula (barrel medic) 
omin2720 C_BQ490714Oryza minuta () 
pame364 209873Persea americana (avocado) 
taes146196 Ta.8458Triticum aestivum (bread wheat) 
taes151059 Ta.10334Triticum aestivum (bread wheat) 
Species
Antirrhinum majus  Arabidopsis thaliana  Citrus clementina  Gerbera hybrid.cultivar  Glycine max  Glycine soja  Gossypium arboreum  Gossypium hirsutum  Hordeum vulgare  Lotus corniculatus  Malus x.domestica  Medicago truncatula  Oryza minuta  Persea americana  Physcomitrella patens  Populus trichocarpa  Triticum aestivum  Vitis vinifera  Zea mays  

Select members and view reduced alignment and phylogenetic tree .
Unipeptide ID Alias Sub Family ID
Antirrhinum majus (snapdragon)  ( Select Species     Clear Species)
  amaj4845 S_AJ8011821
Arabidopsis thaliana (thale cress)  ( Select Species     Clear Species)
  atha94225 At3g088401
Citrus clementina ()  ( Select Species     Clear Species)
  ccle3223 PUT-148a-Citrus_clementina-47501
Gerbera hybrid.cultivar ()  ( Select Species     Clear Species)
  ghyb1812 3243961
Glycine max (soybean)  ( Select Species     Clear Species)
  gmax76594 Gma.105141
Glycine soja (wild soybean)  ( Select Species     Clear Species)
  gsoj1669 PUT-148a-Glycine_soja-26021
Gossypium arboreum (tree cotton)  ( Select Species     Clear Species)
  garb9480 S_BQ4099731
Gossypium hirsutum (cotton (tetraploid))  ( Select Species     Clear Species)
  ghir57800 BQ4099731
Hordeum vulgare (barley)  ( Select Species     Clear Species)
  hvul53432 Hv.107492
Lotus corniculatus (lotus)  ( Select Species     Clear Species)
  lcor13712 Lco.73241
Malus x.domestica (apple)  ( Select Species     Clear Species)
  mdom1560 Mdo.20601
Medicago truncatula (barrel medic)  ( Select Species     Clear Species)
  mtru74435 TC956312
  mtru75825 TC961941
Oryza minuta ()  ( Select Species     Clear Species)
  omin2720 C_BQ4907142
Persea americana (avocado)  ( Select Species     Clear Species)
  pame364 2098732
Physcomitrella patens ()  ( Select Species     Clear Species)
  ppat27106 Ppa.49131
Populus trichocarpa (western balsam poplar)  ( Select Species     Clear Species)
  ptrc11176 PUT-148a-Populus_trichocarpa_X_Populus_deltoides-127141
Triticum aestivum (bread wheat)  ( Select Species     Clear Species)
  taes146196 Ta.84582
  taes151059 Ta.103342
Vitis vinifera (wine grape)  ( Select Species     Clear Species)
  vvin30423 Vvi.118301
Zea mays (corn)  ( Select Species     Clear Species)
  zmay56795 Zm.86001
Subfamily
1  2  

Subfamily ID: 1

SEQUENCE: mdom1560 LENGTH: 211 aa
IPR011127
D-alanine--D-alanine ligase, N-terminal
PF01820 [3-31]T 6.2e-12 PF01820 Dala_Dala_lig_N Dala_Dala_lig_N
no IPR
PTHR23132 [1-211]T 4.5e-110 PTHR23132 FAMILY NOT NAMED FAMILY NOT NAMED
PTHR23132:SF4 [1-211]T 4.5e-110 PTHR23132:SF4 gb def: T16O11.24 protein gb def: T16O11.24 protein
SSF52440 [1-32]T 1.8e-09 SSF52440 PreATP-grasp domain PreATP-grasp domain

Subfamily ID: 2

SEQUENCE: hvul53432 LENGTH: 217 aa
no IPR
PTHR23132 [1-175]T 6e-79 PTHR23132 FAMILY NOT NAMED FAMILY NOT NAMED
PTHR23132:SF4 [1-175]T 6e-79 PTHR23132:SF4 gb def: T16O11.24 protein gb def: T16O11.24 protein
SSF56059 [1-214]T 8.2e-07 SSF56059 Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like
Subfamily
1  2  

Sub family ID: 0
IPR000291: D-alanine--D-alanine ligase/VANA/B/C
Biological ProcessGO:0009252, peptidoglycan biosynthesis
Molecular FunctionGO:0008716, D-alanine-D-alanine ligase activity
IPR011127: D-alanine--D-alanine ligase, N-terminal
Biological ProcessGO:0009252, peptidoglycan biosynthesis
Cellular ComponentGO:0005618, cell wall
Molecular FunctionGO:0008716, D-alanine-D-alanine ligase activity
 
Sub family ID: 1
IPR011127: D-alanine--D-alanine ligase, N-terminal
Biological ProcessGO:0009252, peptidoglycan biosynthesis
Cellular ComponentGO:0005618, cell wall
Molecular FunctionGO:0008716, D-alanine-D-alanine ligase activity
 
Department of Biology | University of North Carolina at Chapel Hill
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